Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 360 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 75.5 bits (184), Expect = 2e-18
 Identities = 76/345 (22%), Positives = 146/345 (42%), Gaps = 23/345 (6%)

Query: 27  IILLALWLGLGDSNAE---EPQTAMEIQVPLAKVGYQTFSATQTDKVIELYGRTAPDRQA 83
           +I L   L  GD++ E    PQ+  E    L  V     +  + +  + + G    +   
Sbjct: 19  VIFLFPRLQGGDTSKEPSKSPQSTPEAMTALP-VDVVEVTPERLENNLNVTGNVLSNESV 77

Query: 84  KIGAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAKAQLKV------RQQEFN 137
            + AEI G +  +   +GQ V K   +  ++  +L AQL+R +   K+      RQ++  
Sbjct: 78  SLRAEITGLVESINFEEGQFVKKGTPLVYLNDDELTAQLDRLEYTKKLYEGQESRQKQLL 137

Query: 138 AASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQVRAPFDGVVETLPIEKGDF 197
           A  A+  +  + ++        L+D    +  V+  LD T ++APFDGV+    I  G  
Sbjct: 138 AREAISQE--EYDIILNQYNTTLSD----IKLVKAQLDKTVIKAPFDGVLGLRQISAGSV 191

Query: 198 VGIGDPVASIIDLHKLVIEADVSERHIQHVQLEQAARIRFIDGTQ---TQGKVRYISRLS 254
           +   D +A+I+++  + IE  + ER+   VQ+   + I F +       +GKV     + 
Sbjct: 192 ISTTDIIANIVNIDPIKIEFSIPERYASQVQV--GSTIEFSNNASHGLKKGKVYAYEPVI 249

Query: 255 SPATNTFAIEVEVDNPQQAIPAGVSAEVELSLMSQAAIKITPAMLALDEEGNLGVKTLQG 314
              T T  +     N  +    G+   +  +L  +    + P+   + E     +  +  
Sbjct: 250 DANTRTLTLRAISPNEDRKFLPGMFVNIRFNLEVEEDALLVPSQSLIPELNGYKLFLVNQ 309

Query: 315 EH-VKFVPIQL-VKAEQDGVWLTGLGEQVDIITRGQGFVRDGDKV 357
           E  V+   +Q+ ++ + +   L GL     ++T G    ++G KV
Sbjct: 310 EGIVQERQVQIGIRTDSEVQILDGLSPGEMVLTTGVLQAKEGMKV 354