Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 71.6 bits (174), Expect = 3e-17
 Identities = 60/285 (21%), Positives = 126/285 (44%), Gaps = 12/285 (4%)

Query: 84  KIGAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAKAQLKVRQQEFNAASALK 143
           ++ A+  G + ++ + +GQ V K Q++  I      A+ +RAKA++   + E+    +L 
Sbjct: 61  EVRAQERGYLEKIYVDEGQFVKKGQLLFKIMPKLYQAEFQRAKAEVSFAEIEYQNTKSLA 120

Query: 144 NKGLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQVRAPFDGVVETLPIEKGDFVGIGDP 203
           ++ +        A A L  A + L+  Q  LD T++RAPF+G+++   +  G  +  G+ 
Sbjct: 121 DRDVVAPNELAMAKAKLDKANAELALAQTHLDFTEIRAPFNGIIDRFHVRVGSLIDEGEL 180

Query: 204 VASIIDLHKLVIEADVSER----HIQHVQLEQAARIRFIDGTQTQ-----GKVRYISRLS 254
           + ++ D   + +  +V E     ++ +++ + +A +  +     +     GKV  I    
Sbjct: 181 LTNLSDNSHMWVYYNVPEAEYLDYMSNLKKDSSATMVNLLMANNKVFGHPGKVETIEADF 240

Query: 255 SPATNTFAIEVEVDNPQQAIPAGVSAEVELSLMSQAAIKITPAMLALDEEGNLGVKTLQG 314
           +  T          NP   +  G +  +++S+  + A+ I P     +      V  L  
Sbjct: 241 NHETGNIPFRATFPNPNGLLRHGETGNIQMSVPFKNAM-IIPQKTTFEVLDKRYVYVLDE 299

Query: 315 EHVKFVPIQLVKAEQDGVWL--TGLGEQVDIITRGQGFVRDGDKV 357
           +H        V AE   +++   GL E   ++  G   VR+ D++
Sbjct: 300 DHKLHAREITVAAEMPHLYVIQDGLEENDKVLLEGLRLVRENDEI 344