Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 358 a.a., periplasmic multidrug efflux lipoprotein precursor from Caulobacter crescentus NA1000 Δfur

 Score = 87.8 bits (216), Expect = 4e-22
 Identities = 80/338 (23%), Positives = 135/338 (39%), Gaps = 13/338 (3%)

Query: 28  ILLALWLGLGDSNAEEPQTAMEIQVPLAKVGYQTFSATQTDKVIELYGRTAPDRQAKIGA 87
           +LLA  L       E    A    V  A+V     +   T       G     R+  +  
Sbjct: 16  LLLAATLSACGGKTETDAPAPPTPVEAARVAAPDAAGAVTGA-----GALERRREMALSF 70

Query: 88  EIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAKAQLKVRQQEFNAASALKNKGL 147
            I G +  +KI  G  V   Q+IA ID   +DA+ ++ +A L+  +++      L  KG 
Sbjct: 71  RIPGVLTTMKIEAGDSVRAGQLIAAIDPAGVDARQQQTQADLERVRRDLERDKVLFEKGY 130

Query: 148 QGEVAFTNAAAALTDAQSSLSTVQRLLDNTQVRAPFDGVVETLPIEKGDFVGIGDPVASI 207
                  +  +AL  AQ++            + +P  GVV     + G+ VG G  VA +
Sbjct: 131 VSRQRIDDRTSALKAAQAAYDAAHFDRRWANLVSPVSGVVLERRAQAGEVVGAGQVVARV 190

Query: 208 IDL-HKLVIEADVSERHIQHVQLEQAARIRF--IDGTQTQGKVRYISRLSSPATNTFAIE 264
            DL   LV+   ++ R    +++   A ++   I  T   G+V  +   +   T    +E
Sbjct: 191 ADLTSPLVLRLPLAARDAARIRVGDPATVKVDEIGETALNGRVTRVGEAADARTGAVLVE 250

Query: 265 VEVDNPQQAIPAGVSAEVELSLMSQAAIKIT----PAMLALDEEGNLG-VKTLQGEHVKF 319
           +E+  P   + +G  A   L++ +   +  T    PA   L+  G    V  + G   + 
Sbjct: 251 IELSAPPSTLRSGQVAHATLNVRAAPGVTTTYARVPAEAVLEANGQRAFVFRVDGGKARR 310

Query: 320 VPIQLVKAEQDGVWLTGLGEQVDIITRGQGFVRDGDKV 357
             +     + D   ++GL     +IT G GFV DG+ V
Sbjct: 311 TAVGFGGFDGDDALVSGLPNGAQVITAGAGFVSDGEAV 348