Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 421 a.a., Multidrug resistance protein MdtA from Azospirillum sp. SherDot2

 Score = 91.7 bits (226), Expect = 3e-23
 Identities = 78/320 (24%), Positives = 147/320 (45%), Gaps = 24/320 (7%)

Query: 47  AMEIQVPLAKVGYQTFSATQTDKVIELYGRTAPDRQAKIGAEIAGRIAEVKIAKGQMVTK 106
           A E  V L  +     +     + + L G  +P  Q+ + AE+A R+AEV + +GQ V +
Sbjct: 84  AAERPVELTALEVTAVAPRALTETVRLSGSVSPMEQSAVKAEVAARLAEVAVREGQAVRR 143

Query: 107 NQIIALIDKGDL-------DAQLERAKAQLKVRQQEFNAASALKNKGL-------QGEVA 152
            +++A  D  +L        A LE A+AQL + ++       L    +       Q E +
Sbjct: 144 GEMLARFDTVELTARLNEKQANLEGARAQLVLAEKTLTKNRTLNRSNIVSDTSLDQAESS 203

Query: 153 FTNAAAALTDAQSSLSTVQRLLDNTQVRAPFDGVVETLPIEKGDFVGIGDPVASIIDLHK 212
           F    A +    + +   ++ L +  V +P DG+V T  +  G+ + +   + +++DL +
Sbjct: 204 FGFQRAQVDALAAQVELARKALRDAVVLSPIDGMVATRSVNPGENLAVNAAMFTVVDLSR 263

Query: 213 LVIEADVSERHIQHVQLEQAARIRFIDG---TQTQGKVRYISRLSSPATNTFAIEVEVDN 269
           + +EA V    +  + + Q A +R ++G    +  G V  I+ ++   +    + V +DN
Sbjct: 264 VEVEATVPAEQVARLAVGQTASLR-VEGFGEREFAGSVARINPMARAGSRAIPVYVTIDN 322

Query: 270 PQQAIPAGVSAEVELSLMSQA--AIKITPAMLALDEEGNLGVKTLQGEHVKFVPIQLVK- 326
              A+  G+ A  E+ L++QA  AI + P  +  D +G+  +    G  V+  P+  V  
Sbjct: 323 RDGALRGGMFASGEV-LVAQAAGAIAVPPVAVRHDGQGDFVLAIADGHTVR-RPVTRVAL 380

Query: 327 -AEQDGVWLTGLGEQVDIIT 345
            A  D V + GL     ++T
Sbjct: 381 WARGDLVQVEGLAPGDRVVT 400