Pairwise Alignments

Query, 366 a.a., efflux RND transporter periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 377 a.a., Toluene efflux pump periplasmic linker protein TtgD precursor from Alteromonas macleodii MIT1002

 Score = 77.0 bits (188), Expect = 8e-19
 Identities = 80/321 (24%), Positives = 141/321 (43%), Gaps = 33/321 (10%)

Query: 62  FSATQTDKVIELY-GRTAPDRQAKIGAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDA 120
           +    +D+ I  + G+      + +   I G++ E+K+  G+ V +NQ+IA +D  D  A
Sbjct: 46  YKVQHSDETIAKFPGQVEAAEYSNLSFRIGGKLQELKVKAGEEVKENQLIARLDDRDAKA 105

Query: 121 QLERAKAQLKVRQQEFNAASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQVR 180
           QL  A++Q  V    F    A   KG      F  A A    A++SL+  Q  L  T++R
Sbjct: 106 QLATAQSQFDVSSAMFERMEASVEKGAVSRSTFDEAKANFLAAKASLTNAQDQLSYTELR 165

Query: 181 APFDGVVETLPIEKGDFVGIGDPVASIIDLH---KLVIEADVSERHIQHVQLEQA----- 232
           APF G++ ++P+E    +    P  +I +LH    + +   + E+ ++ +   +A     
Sbjct: 166 APFAGLIASVPVENYQVI---VPQQTIAELHMPGAIDVTFQLPEQKMRMIDRSRARENRT 222

Query: 233 ---ARIRFIDGTQTQGKVRYISRLSSPATNTFAIEVEVDNPQQ---AIPAGVSAEVELSL 286
              A + F      +    Y    S+      + EV +  P+     + AG+SA V   L
Sbjct: 223 SEMAWVSFSGMPDKRYAAMYKDHESTTRQGELSYEVTITLPEPDDINVLAGMSATV---L 279

Query: 287 MSQAAIKITPAMLALDEEGNLGVKTLQGEHVKFVPIQLVKAEQDGVWLTGLGEQVDI-IT 345
           +  + +  + A L L   G   V T   +  K +  +   ++ D     G  E V++ IT
Sbjct: 280 LDMSKLIESNAKLWLVPFG--AVVTDNADPDKAIVWRFKSSDSDAT--KGTVEAVEVMIT 335

Query: 346 RG-------QGFVRDGDKVLA 359
           RG       +G + D DK++A
Sbjct: 336 RGISNGLLVEGPLNDDDKIVA 356