Pairwise Alignments

Query, 361 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., Uncharacterized UPF0118 membrane protein from Variovorax sp. SCN45

 Score =  177 bits (448), Expect = 5e-49
 Identities = 102/353 (28%), Positives = 179/353 (50%), Gaps = 34/353 (9%)

Query: 12  RVLVVALLASALACY-WLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAFLSCV 70
           R + +ALLA+  A + W++ P+  +++    +++L  P+  W  +K+P   N AA L+  
Sbjct: 8   RGVFLALLAAVTAAFIWVLLPFFGAVLWGVALAILFTPLFRWLLRKMPGKLNAAALLTLA 67

Query: 71  VLTVIIVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWVVKGLSLANHYLPFE 130
           +   I+++PL  +  ++VQ+ +  +QN+ +                   ++ A ++    
Sbjct: 68  ICLFIVILPLAMVGVSLVQEVALVTQNIRSGQ-----------------INFAAYFQQIL 110

Query: 131 EISPQQIAQRIGQF--------------ATTFGSNLVSISAKILGDAT-SFVMHFFLMLF 175
           + SPQ +   + +F              A    S +++  A  +G  T  FV+ FF+ML+
Sbjct: 111 DASPQWLLNLVERFNLGDMAAWQARISAAAGQASQIIASQALAIGQNTFDFVVSFFVMLY 170

Query: 176 VLFFLLRDHDKIISAIRHILPLSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGM 235
           +L+FLLRD   +   +R  +PL++     LL++   V ++ V G+   AIAQG  GG+  
Sbjct: 171 LLYFLLRDGAALSKRMRDAVPLAKPHTHYLLNKFTTVIRATVKGNVAVAIAQGTLGGLAF 230

Query: 236 WLAGFPG-LFWGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSI 294
           W  G  G L W  +M F S +P VG ALIW P  +Y   TG       L    V V+G +
Sbjct: 231 WFLGVQGALLWAVLMAFLSLLPAVGAALIWGPVAIYFLATGHFWQGGVLIFVGVFVIGLV 290

Query: 295 DNLLRPFLMQGSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIY 347
           DN+LRP L+     M   ++  S +GG+ +FG+ G + GP+I A+ M  ++++
Sbjct: 291 DNILRPLLVGKDTQMPDYIVLMSTIGGMAIFGINGFVIGPVIAALFMAAWSLF 343