Pairwise Alignments

Query, 361 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 350 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  119 bits (297), Expect = 2e-31
 Identities = 92/341 (26%), Positives = 167/341 (48%), Gaps = 32/341 (9%)

Query: 12  RVLVVALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAFLSCVV 71
           ++L+VALL + L   W++ P+I++++   I++   +P+  +  + L     LAA L  + 
Sbjct: 10  QILLVALLGAGL---WVMAPFISALLWGAILAFASWPLMRFLTRLLGGRETLAAGLLTMA 66

Query: 72  LTVIIVIPLLFI---FGAIVQQGSKFSQNLY--------AWVTQGGIQALFNHPWVVKGL 120
             +I+ +PL+++       ++  + F +++         AW+  GGI      P+V  G 
Sbjct: 67  WILIVALPLVWLGFNLADHIRDATAFVRDVQVDGLPDAPAWL--GGI------PFV--GE 116

Query: 121 SLANHYLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDATSFVMHFFLMLFVLFFL 180
            L N +   ++     +   I  +    G+ L++ SA+I     S V+   L L  +FF 
Sbjct: 117 RLVNGWQSLDQKGAALLTS-IKPYFGQVGNWLLARSAQI----GSGVLELTLSLVFVFFF 171

Query: 181 LRDHDKIISAIRHILP-LSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAG 239
            RD  ++ + +  +L  L   + +  L  +    +  V G   TA AQ +   IG  +AG
Sbjct: 172 YRDGPRLAAFVLRLLHRLVGERAEYYLDLVAATVQRVVNGVIGTAAAQALLALIGFLIAG 231

Query: 240 FPG-LFWGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLL 298
            PG +  G +    S IP+ G  L WIPAT +L   G+   A+FL +W   V+  +DN+L
Sbjct: 232 VPGAIVLGLVTFMLSLIPM-GPPLAWIPATAWLVWKGEYGMAVFLGVWGTFVISGVDNVL 290

Query: 299 RPFLMQGSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAI 339
           +P+L+     +  +++   + GG+  FG IGL  GP + A+
Sbjct: 291 KPYLISRGGNLPLVIVLLGVFGGLLAFGFIGLFIGPTLLAV 331