Pairwise Alignments

Query, 361 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 372 a.a., Putative membrane protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  140 bits (353), Expect = 5e-38
 Identities = 96/341 (28%), Positives = 167/341 (48%), Gaps = 15/341 (4%)

Query: 15  VVALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAFLSCVVLTV 74
           V+ L    +AC W+V+P+I     A  I +  +P+    +K L    +LA  +  ++L +
Sbjct: 17  VLFLAIMIVACLWIVQPFILGFAWAGTIVIATWPVLLKLQKILWGRRSLAVLVMTLLLVL 76

Query: 75  IIVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWV----VKGLSLANHYLPFE 130
           + VIP+  +  +IV                GG   L +  W+    + G  L   +    
Sbjct: 77  LFVIPVALLVNSIVDGSGPLIH-----AVTGGDMTLPDLAWLNNIPLVGAKLYAGWHSLL 131

Query: 131 EISPQQIAQRIGQFATTFGSNLVSISAKILGDATSFVMHFFLMLFVLFFLLRDHDKIISA 190
           ++    I  ++  +  T  +  V  +A I      F+MH  LML     L    +++   
Sbjct: 132 DMGGSAIMAKVRPYIGTTTTWFVGQAAHI----GRFMMHCALMLLFSALLYWRGEQVAMG 187

Query: 191 IRHIL-PLSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPGLFWGTMM 249
           IRH    L+  + D  +       ++  +G  +TA+ Q V GG+G+ ++G P     T++
Sbjct: 188 IRHFACRLAAKRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGVGLAISGVPYATLLTVV 247

Query: 250 GFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRPFLMQGSAGM 309
              S +  +G   + IPA ++L+ TGDTTW   L +WS AVVG++DN++RP L++  A +
Sbjct: 248 MILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWS-AVVGTLDNVIRPVLIRMGADL 306

Query: 310 NTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEE 350
             L+I   ++GG+  FG+IGL  GP++ A+T  LF+ +  E
Sbjct: 307 PLLLILSGVIGGLIAFGMIGLFIGPVLLAVTWRLFSAWVHE 347