Pairwise Alignments

Query, 361 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., Putative permease PerM (= YfgO) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 78.6 bits (192), Expect = 2e-19
 Identities = 76/340 (22%), Positives = 157/340 (46%), Gaps = 28/340 (8%)

Query: 16  VALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAFLSCVVLTVI 75
           +ALL   +A + ++  + + ++   ++++++  + +W   +L +      + + +VL + 
Sbjct: 16  IALLVILVAGFSILF-FFSGLLAPLLVAIVLAYLLEWPTARLQAIGCSRRWAASIVLILF 74

Query: 76  IVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWVVKGLSLANHYLP--FEEIS 133
           + I LL  F  +            AW  Q GI  + + P ++  LS     LP  +  + 
Sbjct: 75  VGILLLMAFVVMP----------IAW--QQGIYLIRDMPGMLNKLSDFAATLPRRYPALM 122

Query: 134 PQQIAQRIGQFATT----FGSNLVSISAKILGDATSFVMHFFLMLFVLFFLLRDHDKIIS 189
              I   + +   T     G ++V  S   L    +  ++  L+  ++FFL++D +++++
Sbjct: 123 DAGIIDAMAENMRTRMLNMGDSVVKYSLASLVGLLTLAVYLVLVPLMVFFLVKDKEQMLN 182

Query: 190 AIRHILPLSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFP-GLFWGTM 248
           A+R +LP +R    ++ +E+     + + G  L  +  GVA  +G  L G    L    +
Sbjct: 183 AVRRVLPRNRGLAGQVWNEMNQQITNYIRGKVLEMVVVGVATWLGFLLFGLNYSLLLAVL 242

Query: 249 MGFASFIPVVGTALIWIP---ATLYLFLTGDTTWAIFLAIWSVAVVGSID-NLLRPFLMQ 304
           +GF+  IP +G  ++ IP     L+ F  G   W+ F       ++ ++D NLL P L  
Sbjct: 243 VGFSVLIPYIGAFVVTIPVVGVALFQFGLGTEFWSCFAV---YLIIQALDGNLLVPVLFS 299

Query: 305 GSAGMNTLMIFFSLLGGIQLFGLIGLIYG-PLIFAITMVL 343
            +  ++ L+I  S++    L+G  G+ +  PL   I  V+
Sbjct: 300 EAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVV 339