Pairwise Alignments

Query, 361 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 353 a.a., predicted inner membrane protein (NCBI) from Escherichia coli BW25113

 Score = 87.8 bits (216), Expect = 4e-22
 Identities = 80/340 (23%), Positives = 157/340 (46%), Gaps = 28/340 (8%)

Query: 16  VALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAFLSCVVLTVI 75
           +ALL   +A + ++  + + ++   ++++++  + +W   +L S      + + +VL V 
Sbjct: 19  IALLVILVAGFGIIF-FFSGLLAPLLVAIVLAYLLEWPTVRLQSIGCSRRWATSIVLVVF 77

Query: 76  IVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWVVKGLSLANHYLP------F 129
           + I LL  F  +            AW  Q GI  + + P ++  LS     LP       
Sbjct: 78  VGILLLMAFVVLP----------IAW--QQGIYLIRDMPGMLNKLSDFAATLPRRYPALM 125

Query: 130 EEISPQQIAQRIGQFATTFGSNLVSISAKILGDATSFVMHFFLMLFVLFFLLRDHDKIIS 189
           +      +A+ +     T G ++V IS   L    +  ++  L+  ++FFLL+D +++++
Sbjct: 126 DAGIIDAMAENMRSRMLTMGDSVVKISLASLVGLLTIAVYLVLVPLMVFFLLKDKEQMLN 185

Query: 190 AIRHILPLSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFP-GLFWGTM 248
           A+R +LP +R    ++  E+     + + G  L  I  G+A  +G  L G    L    +
Sbjct: 186 AVRRVLPRNRGLAGQVWKEMNQQITNYIRGKVLEMIVVGIATWLGFLLFGLNYSLLLAVL 245

Query: 249 MGFASFIPVVGTALIWIP---ATLYLFLTGDTTWAIFLAIWSVAVVGSID-NLLRPFLMQ 304
           +GF+  IP +G  ++ IP     L+ F  G   W+ F       ++ ++D NLL P L  
Sbjct: 246 VGFSVLIPYIGAFVVTIPVVGVALFQFGAGTEFWSCFAV---YLIIQALDGNLLVPVLFS 302

Query: 305 GSAGMNTLMIFFSLLGGIQLFGLIGLIYG-PLIFAITMVL 343
            +  ++ L+I  S++    L+G  G+ +  PL   I  V+
Sbjct: 303 EAVNLHPLVIILSVVIFGGLWGFWGVFFAIPLATLIKAVI 342