Pairwise Alignments

Query, 361 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 370 a.a., predicted inner membrane protein (NCBI) from Escherichia coli BW25113

 Score =  135 bits (339), Expect = 2e-36
 Identities = 93/350 (26%), Positives = 170/350 (48%), Gaps = 15/350 (4%)

Query: 15  VVALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAFLSCVVLTV 74
           V+ L    +AC W+V+P+I     A  + +  +P+    +K +    +LA  +  ++L +
Sbjct: 17  VLFLAIMIVACLWIVQPFILGFAWAGTVVIATWPVLLRLQKIMFGRRSLAVLVMTLLLVM 76

Query: 75  IIVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWV----VKGLSLANHYLPFE 130
           + +IP+  +  +IV       + +       G   L +  W+    V G  L   +    
Sbjct: 77  VFIIPIALLVNSIVDGSGPLIKAI-----SSGDMTLPDLAWLNTIPVIGAKLYAGWHNLL 131

Query: 131 EISPQQIAQRIGQFATTFGSNLVSISAKILGDATSFVMHFFLMLFVLFFLLRDHDKIISA 190
           ++    I  ++  +  T  +  V  +A I      F++H  LML     L    +++   
Sbjct: 132 DMGGTAIMAKVRPYIGTTTTWFVGQAAHI----GRFMVHCALMLLFSALLYWRGEQVAQG 187

Query: 191 IRHILP-LSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPGLFWGTMM 249
           IRH    L+  + D  +       ++  +G  +TA+ Q V GGIG+ ++G P     T++
Sbjct: 188 IRHFATRLAGVRGDAAVLLAAQAIRAVALGVVVTALVQAVLGGIGLAVSGVPYATLLTVL 247

Query: 250 GFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRPFLMQGSAGM 309
              S +  +G   + IPA ++L+ TGDTTW   L +WS  VVG++DN++RP L++  A +
Sbjct: 248 MILSCLVQLGPLPVLIPAIIWLYWTGDTTWGTVLLVWS-GVVGTLDNVIRPMLIRMGADL 306

Query: 310 NTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEEFRSFLDQQD 359
             ++I   ++GG+  FG+IGL  GP++ A++  LF  + EE     DQ +
Sbjct: 307 PLILILSGVIGGLIAFGMIGLFIGPVLLAVSWRLFAAWVEEVPPPTDQPE 356