Pairwise Alignments

Query, 361 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 367 a.a., AI-2E family transporter YdiK from Dickeya dianthicola ME23

 Score =  144 bits (364), Expect = 3e-39
 Identities = 93/336 (27%), Positives = 168/336 (50%), Gaps = 20/336 (5%)

Query: 23  LACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAFLSCVVLTVIIVIPLLF 82
           +AC+W+V+P+I     A ++ +  +P+    +++L     LA  +  ++L ++ V P   
Sbjct: 27  IACFWVVQPFILGFAWASMVVIATWPLLIRLQQRLWGSRPLAVMVMTLLLVLLFVFPTSI 86

Query: 83  IFGAIVQQGSKFSQNLYAWVTQGGIQALFNHP---WV----VKGLSLANHYLPFEEISPQ 135
           +  +++   S    NL +W+   G Q     P   W+    + G  L + +         
Sbjct: 87  LVSSVIDNVS----NLISWI---GAQGRITPPELDWLQSIPLVGAKLHSSWHSLAHSGGP 139

Query: 136 QIAQRIGQFATTFGSNLVSISAKILGDATSFVMHFFLMLFVLFFLLRDHDKIISAIRHI- 194
            +  +I  +     S +VS +A I      F+MH  LM+     L    D++   +R   
Sbjct: 140 ALMAKIQPYIGQTASWVVSQAAHI----GRFLMHCALMVLFSVLLYSKGDQVALGVRRFA 195

Query: 195 LPLSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFPGLFWGTMMGFASF 254
           + L R   D  +       ++  +G  +TAI Q V GGIG+ LAG P     T++ F S 
Sbjct: 196 IRLGRQGGDSAVILAAQAIRAVALGVVVTAIVQSVLGGIGLALAGIPYTTLLTVLMFLSC 255

Query: 255 IPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDNLLRPFLMQGSAGMNTLMI 314
           +  +G   + IPA ++L+ +GDTTW   L +WS  VVG++DN++RP L++  A +  L+I
Sbjct: 256 VAQIGPLTVLIPAIIWLYWSGDTTWGTVLLVWS-GVVGTLDNIIRPLLIRMGADLPILLI 314

Query: 315 FFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEEE 350
              ++GG+  FG+IGL  GP++ A++  L + + ++
Sbjct: 315 LSGVIGGLLAFGMIGLFIGPVVLAVSYRLLSAWMKD 350