Pairwise Alignments

Query, 361 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 357 a.a., pheromone autoinducer 2 transporter from Alteromonas macleodii MIT1002

 Score = 70.9 bits (172), Expect = 5e-17
 Identities = 76/337 (22%), Positives = 159/337 (47%), Gaps = 21/337 (6%)

Query: 13  VLVVALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSHNNLAAFLSCVVL 72
           +L++ LL +A+   W        +IM  +++ ++  + DW   +L +   ++  L+CVV+
Sbjct: 21  LLILILLTTAVLLLW------GGLIMPVLVAAVIAYLLDWPVCRLVNVG-VSRTLACVVV 73

Query: 73  TV-IIVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWVVKGLSLANHYLPFEE 131
            +  I I +L + G +V   SK S NL   + +  +       W+   L+L + Y  + +
Sbjct: 74  MLGFITITILTLIG-LVPIISKQSVNL---IQETPLIWQKAQEWI---LTLPDKYPDYVQ 126

Query: 132 ISP-QQIAQRIGQFATTFGSNLVSISAKILGDATSFVMHFFLMLFVLFFLLRDHDKIISA 190
           +    Q+ + +       G  L+S S   + +  + +++  L+  ++FF+L+D    + +
Sbjct: 127 VYQIHQMMEGLNDKLVEVGETLISASFSNIANLAALLVYVILVPLMVFFMLKDKLFFLDS 186

Query: 191 IRHILPLSRSQEDRLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFP-GLFWGTMM 249
           I  +LP  R    ++  E+ +   + + G  +  I  G    +   L      +  G ++
Sbjct: 187 ISRLLPKERRLITQVGHEMNSQIANYIRGKVIEIIIVGAVSCVTFVLMDLRYAILLGVLV 246

Query: 250 GFASFIPVVGTALIWIP-ATLYLFLTGDTTWAIFLAIWSVAVVGSID-NLLRPFLMQGSA 307
           GF+  IP +G A++ IP A + +F  G +    +L I +  ++ ++D NLL P L   + 
Sbjct: 247 GFSVLIPYIGAAVVTIPVAVVAMFQWGISPEFWYLMI-AYGIIQALDGNLLVPLLFSEAV 305

Query: 308 GMNTLMIFFSLLGGIQLFGLIGLIYG-PLIFAITMVL 343
            ++ L I  ++L    L+G  G+ +  PL   +  V+
Sbjct: 306 SLHPLYIIVAVLVFGGLWGFWGVFFAIPLATLVKAVI 342