Pairwise Alignments

Query, 361 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 346 a.a., Transport of quorum-sensing signal protein from Alteromonas macleodii MIT1002

 Score = 76.3 bits (186), Expect = 1e-18
 Identities = 82/362 (22%), Positives = 160/362 (44%), Gaps = 33/362 (9%)

Query: 1   MSEKIKLASSHRVLVVALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEKKLPSH 60
           MS +++  ++  ++V+A L   +A        +    ++  I++   PI  W  K     
Sbjct: 1   MSMELRSPTAKILIVLACLVVVMAGIKAASTIMVPFFLSIFIAIACSPIIRWTSKF---- 56

Query: 61  NNLAAFLSCVVLTVIIVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWVVKGL 120
             +  +LS   + ++IV+    + G + Q  ++F +NL  + ++   +      WVV  L
Sbjct: 57  -GVPKWLSITFVILLIVVFGFLLAGLVGQSMTEFRENLPEYRSKLDTE----FAWVVSKL 111

Query: 121 SLANHYLPFEEISPQQIAQRIGQFATTFGSNLVSISAKILGDATSFVMHFFLMLFVLFFL 180
           +  N ++  E I+           AT F S +  + + +           FL+L  + F+
Sbjct: 112 AEFNIHINRELIASHLDPATAMSVATNFISGMGGVLSNL-----------FLILLTVIFM 160

Query: 181 LRDHDKIISAIRHILPLSRSQEDRLLSEIENVSKSAVMGSFL---TAIAQGVAGGIGMWL 237
           L + D    +I   L ++ +     L  I+   +S  + S+L   T ++ G    IG+WL
Sbjct: 161 LFEAD----SIPRRLHIALADPGMKLKHIDRFIRS--VNSYLAIKTVVSLGTGLIIGVWL 214

Query: 238 AGFPG---LFWGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSI 294
                   + W  +    +FIP +G+ +  +PA L  F+      A F A+  V V   +
Sbjct: 215 YVMGVDHFMLWAVLAFMLNFIPNIGSIIAAVPAVLIAFVQLGPASAGFAALGFVLVNTIM 274

Query: 295 DNLLRPFLMQGSAGMNTLMIFFSLLGGIQLFGLIGLIYG-PLIFAITMVLFNIYEEEFRS 353
            N++ P LM    G++TL++F SL+    L G +G++   PL   + + L +  E ++ +
Sbjct: 275 GNMVEPRLMGKGMGLSTLVVFLSLIFWGWLLGTVGMLLSVPLTMVVKIALESREESKWLA 334

Query: 354 FL 355
            L
Sbjct: 335 VL 336