Pairwise Alignments

Query, 361 a.a., AI-2E family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 395 a.a., hypothetical protein from Acinetobacter radioresistens SK82

 Score =  100 bits (250), Expect = 5e-26
 Identities = 84/348 (24%), Positives = 166/348 (47%), Gaps = 20/348 (5%)

Query: 12  RVLVVALLASALACYWLVEPYINSIIMAFIISLLMFPIHDWFEK-KLPSHNNLAAFLSCV 70
           R+ ++A +A  L   +L++P +   +MAF+I+ L  P+  W  K  LP    L+  +  +
Sbjct: 8   RIFILAAIALLLWVLYLLKPVVIPFLMAFLIAYLFSPLVAWLHKYHLPRW--LSISIVFI 65

Query: 71  VLTVIIVIPLLFIFGAIVQQGSKFSQNLYAWVTQGGIQALFNHPWVVKGLSLANHYLPFE 130
            + +++V+ + ++   + QQ      ++ A +    + A F  PWV    ++        
Sbjct: 66  GIGILLVLAIWYVVPLVWQQLVYARDSIPAGIHW--LNATFL-PWVSNTFNVEQM----- 117

Query: 131 EISPQQIAQRIGQFATTFGS--NLVSISAKILGDATSFVM---HFFLMLFVLFFLLRDHD 185
           EI  +QI+  +  +  T  S  ++ ++  ++     +F+       L+  + F+ L D D
Sbjct: 118 EIDTEQISTVVMDYIQTNYSADSIQTMLLRLAQSGLNFIQIGGTIVLIPIIAFYFLLDWD 177

Query: 186 KIISAIRHILPLSRSQED-RLLSEIENVSKSAVMGSFLTAIAQGVAGGIGMWLAGFP-GL 243
           ++++++R ++P    +   +++ E  NV  + V G FL  I  G+   +G+ L G   GL
Sbjct: 178 RMLNSMRRLIPRPYEKNTIQVVHECHNVLGAFVKGQFLVMILLGIVYAVGLQLIGLEVGL 237

Query: 244 FWGTMMGFASFIPVVGTALIWIPATLYLFLTGDTTWAIFLAIWSVAVVGSIDN--LLRPF 301
             G + G AS IP +G A+  I A +         W   + +  V +VG      +L+PF
Sbjct: 238 IIGMVAGLASIIPYLGFAVGIIAAVIATLFQFGLDWTQLILVGVVFMVGQAVEGYILQPF 297

Query: 302 LMQGSAGMNTLMIFFSLLGGIQLFGLIGLIYGPLIFAITMVLFNIYEE 349
           L+    G++ + + F++L G QL G  G++    + A+ +VL     E
Sbjct: 298 LLGDKIGLSPVAVVFAVLAGAQLAGFFGMLIALPMAAVIVVLLRHLRE 345