Pairwise Alignments

Query, 340 a.a., 16S rRNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., 16S rRNA G1207 methylase RsmC from Rhodanobacter sp. FW510-T8

 Score = 87.4 bits (215), Expect = 5e-22
 Identities = 72/260 (27%), Positives = 112/260 (43%), Gaps = 15/260 (5%)

Query: 73  ADLNADLILLYWPKAKQEAEYLLAMLLAKLGTGTEIVVVGENRSGVKSIEKMFAAYGPIH 132
           AD    L+LL  P+ + EA  L A  L  L  G  ++    N  GVKS E   A      
Sbjct: 79  ADEKFPLVLLLPPRQRDEARALFARALWHLAPGGTVLAAMPNAEGVKSGEADLARLAGAV 138

Query: 133 KYDSARRCSFYWGHCVHTPAAFDIEQWFKSYAVDYQGHELTIR---SLPGVFSHGEFDLG 189
           ++ S  +C  +W     TP   D++Q   +  +        +    S PG+F+    D  
Sbjct: 139 QHLSKHKCRAFWS----TPQPADVDQGLLAEWLALDEPRSIVEGYISRPGLFAWDRIDRA 194

Query: 190 SRLLLDTLP-PLSGKVIDIGSGAGVLGC-VMAKLNPHIELEMTDISALAIRSSQETLV-- 245
           S LL + LP  L G+V D+G+G G L   V+A+    + +++ +  A A+  ++  L   
Sbjct: 195 SALLAEHLPRDLHGRVADLGAGYGYLSTQVVARCPRVVAIDLYEAEARALEPARCNLARA 254

Query: 246 ----ANQLHGHVYPSDMFSDTGHHYNYIVTNPPFHSGLETSYSATERLLAESVDHLASGG 301
               A  +   V   D+       Y+ IV+NPPFH G           +  + + L  GG
Sbjct: 255 QRECARAVAVTVRWHDVTRGLAQRYDAIVSNPPFHQGRADLPELGRAFIVSAAEALLPGG 314

Query: 302 SIWVVANSFLKYPPILEQAF 321
            + +VAN  L Y  +L   F
Sbjct: 315 RLLIVANRHLPYEDVLAARF 334