Pairwise Alignments

Query, 340 a.a., 16S rRNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 374 a.a., class I SAM-dependent methyltransferase from Pseudomonas fluorescens SBW25

 Score = 80.1 bits (196), Expect = 8e-20
 Identities = 70/269 (26%), Positives = 112/269 (41%), Gaps = 10/269 (3%)

Query: 78  DLILLYWPKAKQEAEYLLAMLLAKLGTGTEIVVVGENRSGVKSIEKMFAAY-GPIHKYDS 136
           D +L+  PK     E  L  L  +L  G E++     +   ++  ++   Y GP+    +
Sbjct: 110 DRVLIRVPKTLALLEEQLIRLQGQLAPGAEVIAGAMIKHLPRAAGELLERYIGPMQASLA 169

Query: 137 ARRCSFYWGHCVHTPAAFDIEQWFKSYAVDYQGHELTIRSLPGVFSHGEFDLGSRLLLDT 196
            ++           P A  +  +   Y VD    EL   +   VF     D+G+R  L  
Sbjct: 170 VKKARLLIASVEDRPVA--VSPYPTRYTVDAPAIELLNHA--NVFCRESLDIGTRAFLPH 225

Query: 197 LPPLSG--KVIDIGSGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVA--NQLHGH 252
           LP   G  +V D+G G G+L    A  NP     + D S +A++S+QE   A   Q    
Sbjct: 226 LPKNLGSARVADLGCGNGILAIASALQNPEAHYTLVDESYMAVQSAQENWHAALGQREAV 285

Query: 253 VYPSD-MFSDTGHHYNYIVTNPPFHSGLETSYSATERLLAESVDHLASGGSIWVVANSFL 311
           +   D +        + ++ NPPFH           R+  ++ D L  GG++++V N  L
Sbjct: 286 IRAGDGLAGQAPDSLDVVLCNPPFHQQQVVGDFLAWRMFQQARDALVVGGALYIVGNRHL 345

Query: 312 KYPPILEQAFGHCDIAAKTNKFAIYHAKK 340
            Y   L + F   +  A T KF I  A+K
Sbjct: 346 GYHTKLARLFRGVEQVATTPKFVILKARK 374