Pairwise Alignments

Query, 340 a.a., 16S rRNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 349 a.a., 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC from Pectobacterium carotovorum WPP14

 Score =  270 bits (691), Expect = 3e-77
 Identities = 148/341 (43%), Positives = 210/341 (61%), Gaps = 10/341 (2%)

Query: 1   MQPYTAPSEIALRQLDYFADKHVLVAGEVEDRFPIELRQYCASVSVFTTHYGYYSQLKAY 60
           M   T  SE+ LR  D F  + VL AG+++D  P +     ASV V    Y ++ Q+   
Sbjct: 1   MSALTPASEVILRHSDEFLSRRVLFAGDLQDTLPAQFE--AASVRVHCNQYHHWQQMAKP 58

Query: 61  PEITRYFGEQLTADL--NADLILLYWPKAKQEAEYLLAMLLAKLGTGTEIVVVGENRSGV 118
                 +G    A L  ++D ++ YWPK+KQEAE+ L  LL+ +  GTEI VVGENRSGV
Sbjct: 59  LGDNAQYGLVADAALVADSDTLIYYWPKSKQEAEFQLRNLLSLMPVGTEIFVVGENRSGV 118

Query: 119 KSIEKMFAAYGPIHKYDSARRCSFYWGHCVHTPAAFDIEQWFKSYAVDYQGHELTIRSLP 178
           +S E + + +  + K DSARRC  Y G  +   A+F +++W+  Y  D     +T+++LP
Sbjct: 119 RSAEIVLSDFVELVKIDSARRCGLYHGR-IDKQASFTLDEWWDEYVTD----GVTVKTLP 173

Query: 179 GVFSHGEFDLGSRLLLDTLPP-LSGKVIDIGSGAGVLGCVMAKLNPHIELEMTDISALAI 237
           GVFS  + D GSRLLL T  P + GKV+DI  GAGVL  V+AK +P I L ++D+SA A+
Sbjct: 174 GVFSRDDLDPGSRLLLSTFEPHMKGKVLDIACGAGVLASVLAKQSPKIRLTLSDVSAAAV 233

Query: 238 RSSQETLVANQLHGHVYPSDMFSDTGHHYNYIVTNPPFHSGLETSYSATERLLAESVDHL 297
            SS+ TL AN L G V  S+++SD    ++ IV+NPPFH GL+TS  A E L+  +V HL
Sbjct: 234 ESSKATLAANALEGSVIASNVYSDIDGRFDMIVSNPPFHDGLQTSLQAAEMLIRGAVTHL 293

Query: 298 ASGGSIWVVANSFLKYPPILEQAFGHCDIAAKTNKFAIYHA 338
             GG + +VAN+FL YP +L+ AFG  ++ A+T +F +Y A
Sbjct: 294 PIGGQLRIVANAFLPYPALLDAAFGSHEVLAQTGRFKVYQA 334