Pairwise Alignments

Query, 340 a.a., 16S rRNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC from Erwinia tracheiphila SCR3

 Score =  266 bits (681), Expect = 4e-76
 Identities = 139/341 (40%), Positives = 211/341 (61%), Gaps = 10/341 (2%)

Query: 1   MQPYTAPSEIALRQLDYFADKHVLVAGEVEDRFPIELRQYCASVSVFTTHYGYYSQLKAY 60
           M  +T  SE+ LR  D F+ +HVL AG+++D  P +L    A   V T  Y ++ +L   
Sbjct: 1   MSAFTPASEVILRHRDEFSQRHVLFAGDLQDDLPAQLDT--ALSRVHTQQYHHWQRLNRT 58

Query: 61  PEITRYFGEQLTADL--NADLILLYWPKAKQEAEYLLAMLLAKLGTGTEIVVVGENRSGV 118
                ++G     +   N+D ++ +WPK+K EA++ L  LLA L  G+++ VVGENRSGV
Sbjct: 59  LGENAHYGLLAAPETVANSDTLIYFWPKSKSEAQFQLENLLALLPAGSDLFVVGENRSGV 118

Query: 119 KSIEKMFAAYGPIHKYDSARRCSFYWGHCVHTPAAFDIEQWFKSYAVDYQGHELTIRSLP 178
           +S E + A +  + K DSARRC  Y G     PA FD + W+  YA+     +LT+++LP
Sbjct: 119 RSAEPILAEWSTLTKIDSARRCGLYHGQLDKKPA-FDKQAWWTDYALG----DLTVKTLP 173

Query: 179 GVFSHGEFDLGSRLLLDTLPP-LSGKVIDIGSGAGVLGCVMAKLNPHIELEMTDISALAI 237
           GVFS    D+GS +LL T  P   GKV+DIG GAGVL  ++A+ +P + L MTD+SA A+
Sbjct: 174 GVFSRDGLDVGSNMLLSTFKPHTKGKVLDIGCGAGVLSAMLARFSPKVRLTMTDVSAAAV 233

Query: 238 RSSQETLVANQLHGHVYPSDMFSDTGHHYNYIVTNPPFHSGLETSYSATERLLAESVDHL 297
            +SQ TLV N L G+V+ S+++SD    ++ I++NPPFH G++TS    ++L+  +V HL
Sbjct: 234 EASQATLVENGLEGNVFASNVYSDVNGRFDLIMSNPPFHDGVQTSLDTAQQLIRGAVKHL 293

Query: 298 ASGGSIWVVANSFLKYPPILEQAFGHCDIAAKTNKFAIYHA 338
             GG + +VAN+FL YP +L++ FG  ++  +  +F +Y A
Sbjct: 294 DIGGELRIVANAFLPYPQLLDETFGSHEVLIQNGRFKVYRA 334