Pairwise Alignments

Query, 340 a.a., 16S rRNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., 16S RNA G1207 methylase RsmC from Enterobacter asburiae PDN3

 Score =  260 bits (665), Expect = 3e-74
 Identities = 142/345 (41%), Positives = 204/345 (59%), Gaps = 22/345 (6%)

Query: 1   MQPYTAPSEIALRQLDYFADKHVLVAGEVEDRFPIELRQYCASVSVFTTHYGYYSQLKAY 60
           M  +T  SE+ LR  D F +  +L AG+++D  P      CA     T +Y ++  L   
Sbjct: 1   MSAFTPASEVLLRHSDDFEESRILFAGDMQDDLPARFN--CAESRAHTQYYHHWQVL--- 55

Query: 61  PEITRYFGEQLTADLNA--------DLILLYWPKAKQEAEYLLAMLLAKLGTGTEIVVVG 112
              +R  GE+    L A        D ++ YWPK K EA++ L  LL+ L  G +I VVG
Sbjct: 56  ---SRQMGERARFSLVAEQSDIADCDTLIYYWPKNKPEAQFQLMNLLSLLPVGCDIFVVG 112

Query: 113 ENRSGVKSIEKMFAAYGPIHKYDSARRCSFYWGHCVHTPAAFDIEQWFKSYAVDYQGHEL 172
           ENRSGV+S E+M   Y P++K DSARRC  Y G  +     FD + ++  Y +D     L
Sbjct: 113 ENRSGVRSAEQMLEGYAPLNKVDSARRCGLYHGR-LEKQTTFDPQAYWDEYQLD----GL 167

Query: 173 TIRSLPGVFSHGEFDLGSRLLLDTLPP-LSGKVIDIGSGAGVLGCVMAKLNPHIELEMTD 231
           TI++LPGVFS    D GS+LLL TL P   GKV+D+G GAGVL  V+A  +P + L + D
Sbjct: 168 TIKTLPGVFSRDALDTGSKLLLSTLTPHTKGKVLDVGCGAGVLSTVLASHSPKVRLTLCD 227

Query: 232 ISALAIRSSQETLVANQLHGHVYPSDMFSDTGHHYNYIVTNPPFHSGLETSYSATERLLA 291
           +SA A+ +S+ TL AN + G V  S++FSD    ++ I++NPPFH G+ETS  A + L+ 
Sbjct: 228 VSAPAVEASRATLAANGIEGEVIASNVFSDVTGRFDMIISNPPFHDGMETSLEAAQTLIR 287

Query: 292 ESVDHLASGGSIWVVANSFLKYPPILEQAFGHCDIAAKTNKFAIY 336
            +  HL SGG + +VAN+FL YP +L++ FG  ++ A+T +F +Y
Sbjct: 288 GATRHLNSGGELRIVANAFLAYPKVLDETFGFHEVIAQTGRFKVY 332