Pairwise Alignments

Query, 340 a.a., 16S rRNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 378 a.a., 16S RNA G1207 methylase RsmC from Enterobacter asburiae PDN3

 Score = 83.2 bits (204), Expect = 1e-20
 Identities = 73/278 (26%), Positives = 117/278 (42%), Gaps = 29/278 (10%)

Query: 79  LILLYWPKAKQEAEYLLAMLLAKLGTGTEIVVVGENR----SGVKSIEKMFAAYGPIHKY 134
           L+L+  PK     E  L  L   +   T I+   + R    S ++  EK+         +
Sbjct: 109 LVLIKVPKTMALLEQQLRALRKVVTPETRIIAGAKARDIHTSTLELFEKVLGPTTTTLAW 168

Query: 135 DSAR--RCSFYWGHCVHTPAAFDIEQWFKSYAVDYQGHELTIRSLPGVFSHGEFDLGSRL 192
             AR   C+F        P       W        +G + TI +   VFS    D+G+R 
Sbjct: 169 KKARLINCTFSAPELADAPETLS---W------KLEGTDWTIHNHANVFSRTGLDIGARF 219

Query: 193 LLDTLPP-LSGKVIDIGSGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVANQLHG 251
            ++ LP  L G+++D+G G GV+G  +   NP   +  +D S +A+ SS+  +  N    
Sbjct: 220 FMEHLPENLEGEIVDLGCGNGVIGLTLLAKNPDASVVFSDESPMAVASSRLNVETNMPEA 279

Query: 252 HVYPSDMFSDT-----GHHYNYIVTNPPFHSGLETSYSATERLLAESVDH----LASGGS 302
                 M ++         +N +  NPPFH      ++ T+ +  E   H    L   G 
Sbjct: 280 LDRCEFMINNALSGVEPFRFNAVFCNPPFHQ----KHALTDNVAWEMFHHARRCLKINGE 335

Query: 303 IWVVANSFLKYPPILEQAFGHCDIAAKTNKFAIYHAKK 340
           +++VAN  L Y   L++ FG+C   A  NKF +  A K
Sbjct: 336 LYIVANRHLDYFHKLKKIFGNCVTIATNNKFVVLKAVK 373