Pairwise Alignments

Query, 340 a.a., 16S rRNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC from Dickeya dadantii 3937

 Score =  256 bits (653), Expect = 8e-73
 Identities = 140/341 (41%), Positives = 204/341 (59%), Gaps = 10/341 (2%)

Query: 1   MQPYTAPSEIALRQLDYFADKHVLVAGEVEDRFPIELRQYCASVSVFTTHYGYYSQLKAY 60
           M   T  SE+ LR  D F  + VL AG+++D  P       A+V+V TT Y ++ QL+  
Sbjct: 1   MSALTPASEVILRHSDEFVSRRVLFAGDLQDTLPANFD--AAAVTVHTTQYHHWQQLQPV 58

Query: 61  PEITRYFGEQLTADLNA--DLILLYWPKAKQEAEYLLAMLLAKLGTGTEIVVVGENRSGV 118
                +F     A+  A  D ++ YWPK+KQEA++ L+ LL+ L  G +I VVGENRSGV
Sbjct: 59  LGDNVHFSLLAQAETVAGCDTLIYYWPKSKQEAQFQLSNLLSLLPVGCDIFVVGENRSGV 118

Query: 119 KSIEKMFAAYGPIHKYDSARRCSFYWGHCVHTPAAFDIEQWFKSYAVDYQGHELTIRSLP 178
           +S E +      ++K DSARRC  Y G  +  P+AF +E W+  Y VD     + + +LP
Sbjct: 119 RSAEGILEPIAAVNKIDSARRCGLYHGR-LEAPSAFALEDWWLEYDVD----GVPVHTLP 173

Query: 179 GVFSHGEFDLGSRLLLDTLPP-LSGKVIDIGSGAGVLGCVMAKLNPHIELEMTDISALAI 237
           GVFS    D GS+LLL TL P   GKV+D+  GAGVL    A+L+P I L ++D+ A A+
Sbjct: 174 GVFSREGLDTGSQLLLSTLEPHRKGKVLDLACGAGVLAASFARLSPKIRLTLSDVGAAAL 233

Query: 238 RSSQETLVANQLHGHVYPSDMFSDTGHHYNYIVTNPPFHSGLETSYSATERLLAESVDHL 297
            +S+ TL AN L G V  S+ +SD    ++ I++NPPFH G++TS  A E ++  +  HL
Sbjct: 234 EASRSTLAANGLEGQVIASNAYSDIQGRFDLIISNPPFHDGMQTSLHAAEVMIRGAASHL 293

Query: 298 ASGGSIWVVANSFLKYPPILEQAFGHCDIAAKTNKFAIYHA 338
              G + +VAN+FL YP +L++ FG  ++ A+T +F +Y A
Sbjct: 294 NIEGELRIVANAFLPYPALLDETFGSHEVIAQTGRFRVYRA 334