Pairwise Alignments

Query, 340 a.a., 16S rRNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., class I SAM-dependent methyltransferase from Brevundimonas sp. GW460-12-10-14-LB2

 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 71/268 (26%), Positives = 122/268 (45%), Gaps = 10/268 (3%)

Query: 76  NADLILLYWPKAKQEAEYLLAMLLAKLGTGTEIVVVGENRSGVKSIEKMFAAYGPIHKYD 135
           +AD +++Y P    E  Y+LA+ L  L  G  + V+     G   + K   A+G     +
Sbjct: 39  SADSVMIYAPPGVLERRYVLALALKALKVGGRLDVMAPKDKGGSRLAKELKAFG----VE 94

Query: 136 SARRCSFYWGHCVHTPAAFDIEQWFKSYAVDYQG--HELTIRSLPGVFSHGEFDLGSRLL 193
            A     +   C+       +E   ++ A         L   S PGVF+    D GS LL
Sbjct: 95  VAETAKAHHRRCIVIRPE-TVEGLDEAIAAGEPQIVPGLEAWSQPGVFAWDRIDPGSALL 153

Query: 194 LDTLPPLSGKVIDIGSGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVANQLHGHV 253
            + LP + G+ +D+G G G L  V+ +     +L+M D+   AI++++  +  ++    V
Sbjct: 154 AEHLPAMKGEGVDLGCGYGALSIVVLRSPAVSKLKMVDLDRRAIQAARRNIEDDR--AKV 211

Query: 254 YPSDMFS-DTGHHYNYIVTNPPFHSGLETSYSATERLLAESVDHLASGGSIWVVANSFLK 312
           + SD  + +     +++V+NPPFH G        +  + ++ + L  GG  WVVAN  L 
Sbjct: 212 WWSDARTLEAKGDKDFVVSNPPFHDGGAEDRRLGQAFIRKAAELLKKGGVAWVVANRHLP 271

Query: 313 YPPILEQAFGHCDIAAKTNKFAIYHAKK 340
           Y   L  AF    + A+   + ++ A K
Sbjct: 272 YEAELNTAFKRVRLVAEAGGYKLFEAVK 299