Pairwise Alignments

Query, 340 a.a., 16S rRNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., Ribosomal RNA small subunit methyltransferase C from Acinetobacter radioresistens SK82

 Score =  189 bits (480), Expect = 9e-53
 Identities = 110/335 (32%), Positives = 174/335 (51%), Gaps = 8/335 (2%)

Query: 8   SEIALRQLDYFADKHVLVAGEVEDRFPIELRQYCASVSVFTTHYGYYSQLKAYPEITRYF 67
           SE+ LRQ+D  + + VL      D+   +L       S++T ++  Y   +A    T + 
Sbjct: 5   SEVVLRQIDQLSGQ-VLFIHAPNDQLLNQLGPRI-DASIWTWNFSDYQGFQAAGFKTHFG 62

Query: 68  GEQLTADLNADLILLYWPKAKQEAEYLLAMLLAKLGTGTEIVVVGENRSGVKSIEKMFAA 127
            +      N   ++++ PK+K+   Y+L  +++ L  G  + +VGE + GV+   K    
Sbjct: 63  VDFPQQQFNQ--VVIFVPKSKELLNYVLHNIVSHLEIGQSVFLVGEKKGGVERAAKQLHT 120

Query: 128 YGPIHKYDSARRCSFYWGHCVHTPAAFDIEQWFKSYAVDYQGHELTIRSLPGVFSHGEFD 187
           +G   K DSAR C F+     H      +E W K+Y V  +  ++ I +LPGVFS    D
Sbjct: 121 FGHPVKLDSARHCQFWQLKLEHIEQQKPLESWLKTYTVQLKDQQIEICALPGVFSQSHLD 180

Query: 188 LGSRLLLDTLPPL-SGKVIDIGSGAGVLGCVMAKLNPHIELEMTDISALAIRSSQETLVA 246
           +G+ +L+  L  + SG + D G GAGV+ C +AK NP   +   D+ A A+RS++ T   
Sbjct: 181 VGTAVLIPYLDQVKSGTLADFGCGAGVIACYLAKSNPANTVYALDVDAFALRSTELTFQR 240

Query: 247 NQLHG---HVYPSDMFSDTGHHYNYIVTNPPFHSGLETSYSATERLLAESVDHLASGGSI 303
           NQ+      + P    +D     + IV+NPPFH G+ T Y A+E L   +  HL +GG +
Sbjct: 241 NQVPASQLRLQPVSSIADAPFELDAIVSNPPFHQGIHTHYEASEELCKTAPQHLKNGGEL 300

Query: 304 WVVANSFLKYPPILEQAFGHCDIAAKTNKFAIYHA 338
           W+VAN FL YP ++EQ FG C + A    F + +A
Sbjct: 301 WIVANRFLNYPHLIEQRFGQCTLKADQQGFKVLYA 335