Pairwise Alignments

Query, 1129 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 633 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  194 bits (493), Expect = 2e-53
 Identities = 142/498 (28%), Positives = 247/498 (49%), Gaps = 41/498 (8%)

Query: 345 EAFARVRQLEKLFVFAMLT--AIVLVVIASHYLSNFITSPLLKLTWAAERVSAGDLDEAM 402
           +AF++ RQ E LF   +L   A++   + +  L+  ++ P+  +  A + +  GD    +
Sbjct: 157 DAFSQ-RQQEILFKAGILALFALLFTFLLARRLAASLSQPISAMGHAVKAIQQGDYKTPL 215

Query: 403 INTERKDEIGRLAVSFERMQRSIREKISLIKSQNKELESNLLIIRKQNDELQLANKLKDE 462
              +   E+G L+       R I      +   ++E +  +  + +  +E + AN  K +
Sbjct: 216 PIVD-DSELGDLS-------RHINNLAEGLNQASREQQQAMAQLIQTREEAERANNAKSD 267

Query: 463 FLATTSHELRTPLHGMIGIAEALISGANGPISAAHKYQLDIIISSGQRLATLVDDLLDYH 522
           FLA  SHELRTP++G++G+ + L       ++        +   S + L  +++D+LD+ 
Sbjct: 268 FLAMMSHELRTPMNGVLGMLQLL---ETTEMTEEQTEYAALASESTEHLLKVINDILDFS 324

Query: 523 KMRYGALDIQRCAVDLSSATRLVLELSHHLLGKKTLRIINQVSEQP----VWVSADPQRL 578
           ++   AL+++    +L+       +   H   ++ L +  ++S  P    + V  DP R+
Sbjct: 325 RIERAALELEHIPFNLADLINSCAQAFQHSAQQRGLAL--ELSIPPGMDTLRVQGDPTRI 382

Query: 579 EQVLYNLIGNAIKYTSEGKIVISATY--IDDKV---RVQVVDTGQGIPAEQLEHIFEPLI 633
            Q+L NLIGNA+K+T  G + I   +  +D ++      V D+G GI AE+LE +F+   
Sbjct: 383 RQILVNLIGNALKFTEHGNVSIEPHWQTLDHELVWFTCTVRDSGIGISAERLELMFDAFQ 442

Query: 634 QAGHDASRYRQGAGLGLSISRQLIELMHGTLYVSSQPMVGTTFSFTLPLASEEEIAQARL 693
           QA    SR   G GLGL I+R L E M GTL   S+   G+ F+  +PLA ++    A  
Sbjct: 443 QADSSISRRYGGTGLGLPIARTLAERMGGTLRAQSEEARGSVFTLEIPLAIDQHSVPA-- 500

Query: 694 TELPHFQAPEVLDSELPEQSNLPENEHGPLLLVADDEPVNLRVLDSFLRLEGYRVHTAQD 753
                      + S+   ++   +  H   +L+ +D PVN  V+++ LR  G+ V  A D
Sbjct: 501 -----------IASDADGKTGAGDGRH---VLLVEDNPVNRAVVEAMLRSLGFEVSLATD 546

Query: 754 GHQVLEAIKREKPELVLLDIMMPGMSGYQVCEKLRQTYDHAELPIIMLTALNQSDDRVRG 813
           G + + + +      +L+D  +P + GY+   ++RQ    A+LPII LTA     DR   
Sbjct: 547 GAEAIRSAESLIFTAILMDCRLPVIDGYEATRQIRQLPGCADLPIIALTANALQGDREAC 606

Query: 814 FEAGANDYLSKPFNKQEL 831
             AG NDYL+KPF + +L
Sbjct: 607 LAAGMNDYLAKPFKRTDL 624