Pairwise Alignments

Query, 1129 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 890 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score =  171 bits (434), Expect = 2e-46
 Identities = 124/405 (30%), Positives = 196/405 (48%), Gaps = 41/405 (10%)

Query: 440 ESNLLIIRKQNDELQLANKLKDEFLATTSHELRTPLHGMIGIAEALISGANGPISAAHKY 499
           E+ +   R+     + AN+ K  FLAT SHE+RTP++G+IG+   L+     P     ++
Sbjct: 236 ETAMATARQAQQVAERANQAKAAFLATMSHEIRTPMNGVIGMTGLLLDTQLDP---EQRH 292

Query: 500 QLDIIISSGQRLATLVDDLLDYHKMRYGALDIQRCAVDLSSATRLVLELSHHLLGKKTLR 559
               I  S + L T+++D+LD+ K+  G LD++    +L      ++++       K + 
Sbjct: 293 FATTIRDSAESLLTVINDILDFSKLEAGKLDLESTDFELVGLVESIVDILAPRAHAKGIE 352

Query: 560 IINQVS-EQPVWVSADPQRLEQVLYNLIGNAIKYTSEGKIVISA---TYIDD--KVRVQV 613
           I + V  + P WV  DP RL Q+L NL GNAIK+TS G I I     T  D   ++R  V
Sbjct: 353 IASMVDPDLPAWVRGDPGRLRQILMNLAGNAIKFTSHGGISIEVRDETSPDGAGRLRFDV 412

Query: 614 VDTGQGIPAEQLEHIFEPLIQAGHDASRYRQGAGLGLSISRQLIELMHGTLYVSSQPMVG 673
            DTG GIP + +  +F   +Q     +R   G GLGL+IS++L E+M GT+ V S P  G
Sbjct: 413 RDTGIGIPQDAIGRLFSMFMQVDASTARRYGGTGLGLAISKRLTEMMGGTIGVESTPGAG 472

Query: 674 TTFSFTLPLASEEEIAQARLTELPHFQAPEVLDSELPEQSNLPENEHGPLLLVADDEPVN 733
           + F F+LP                 FQ  E    + P+ +       G  +LV DD P+N
Sbjct: 473 SLFWFSLP-----------------FQMVETAPPQRPDLA-------GRRILVVDDSPIN 508

Query: 734 LRVLDSFLRLEGYRVHTAQDGHQVLEAIKREKP-----ELVLLDIMMPGMSGYQVCEKLR 788
             VL+  LR  G  V +  D    L  + R        E  ++D  MPG++G  +  ++R
Sbjct: 509 RDVLERQLRGFGVIVASCADAESALAELGRAAATGTPWEAAIIDARMPGVTGSDLIGRIR 568

Query: 789 QTYDHAELPIIMLTALNQSDDRVRGFEAGANDYLSKPFNKQELAA 833
                A + +I+ ++   S +        A+ ++ KP  +Q + A
Sbjct: 569 AEPVLAPMGLIIASSQGLSPE---DGSPKADAFIHKPLRRQTILA 610



 Score = 83.2 bits (204), Expect = 8e-20
 Identities = 75/231 (32%), Positives = 110/231 (47%), Gaps = 21/231 (9%)

Query: 691 ARLTELPHFQAPEVLDSELPEQSNLPENEHGPLLLVADDEPVNLRVLDSFLRLEGYRVHT 750
           AR+  LPH   P + DS   E   +P       +LVA+D PVN +V    LR  G+ V  
Sbjct: 613 ARVLGLPH--DPGLQDSPESEPEAIPRPARRLRILVAEDNPVNQQVAVGLLRKLGHSVDV 670

Query: 751 AQDGHQVLEAIKREKPELVLLDIMMPGMSGYQVCEKLRQTYDHAE-LPIIMLTALNQSDD 809
           A DG + +EA++    +LVL+D+ MP M G Q    +R     AE +PI+ +TA     D
Sbjct: 671 AADGAEAVEAVRSRPYDLVLMDVQMPEMDGLQATAAIRALTGGAERVPIVAMTANAMRGD 730

Query: 810 RVRGFEAGANDYLSKPFNKQ---ELAARIVAHLTASKAELRRIENAQLQKELKHRAMVEA 866
                +AG + Y+SKP +++   E+ A+  A   A+K           Q E    + VE 
Sbjct: 731 DRMCLDAGMDRYISKPIDRRKLMEVLAQYAAEPPAAKPP---------QAENPAPSAVEI 781

Query: 867 SLLETQGRLLEQL--ESAPEAILCVKEGNKVRFANEAAARLFRRTPEQLKR 915
            +L+    L E L  E+  E +    E    R A E AA L R   E+++R
Sbjct: 782 DVLDL---LCEDLGVETVVEILAKFFEDATSREA-ECAAALAREDHERVRR 828