Pairwise Alignments

Query, 1129 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1197 a.a., acid-sensing system histidine kinase EvgS from Escherichia coli ECRC62

 Score =  187 bits (474), Expect = 6e-51
 Identities = 126/396 (31%), Positives = 204/396 (51%), Gaps = 36/396 (9%)

Query: 456  ANKLKDEFLATTSHELRTPLHGMIGIAEALISGANGPISAAHKYQ-LDIIISSGQRLATL 514
            A   K +FLAT SHE+RTP+  ++G  E L+SG+   +S   + + + +  ++GQ L  L
Sbjct: 708  ATVAKSQFLATMSHEIRTPISSIMGFLE-LLSGSG--LSKEQRVEAISLAYATGQSLLGL 764

Query: 515  VDDLLDYHKMRYGALDIQRCAVDLSSATRLVLELSHHLLGKKTLRI-INQVSEQPVWVSA 573
            + ++LD  K+  G   +Q   VD+ +  +        +   K++ +  +        V  
Sbjct: 765  IGEILDVDKIESGNYQLQPQWVDIPTLVQNTCHSFGAIAASKSIALSCSSTFPDHYLVKI 824

Query: 574  DPQRLEQVLYNLIGNAIKYTSEG--KIVISATYIDDK---VRVQVVDTGQGIPAEQLEHI 628
            DPQ  +QVL NL+ NA+K+T+EG  KI  S  +IDD    +++ ++D+G G+  E+ + +
Sbjct: 825  DPQAFKQVLSNLLSNALKFTTEGAVKITTSLVHIDDNHAVIKMTIMDSGSGLSQEEQQQL 884

Query: 629  FEPLIQAGHDASRYRQGAGLGLSISRQLIELMHGTLYVSSQPMVGTTFSFTLPLASEEEI 688
            F+   Q    A R + G+GLGL I ++LI+ M G L + S P +GTTF+ T+P+   +++
Sbjct: 885  FKRYSQTS--AGRQQTGSGLGLMICKELIKNMQGDLSLESHPGIGTTFTITIPVEISQQV 942

Query: 689  AQARLTELPHFQAPEVLDSELPEQSNLPENEHGPLLLVADDEPVNLRVLDSFLRLEGYRV 748
            A            PE L                  +L+ADD P N  +L   L L GY V
Sbjct: 943  ATVEAKAEHPITLPEKLS-----------------ILIADDHPTNRLLLKRQLNLLGYDV 985

Query: 749  HTAQDGHQVLEAIKREKPELVLLDIMMPGMSGYQVCEKLRQTYDHAELPIIMLTALNQSD 808
              A DG Q L  +  +  +L++ D+ MP M G+++  KLR+   ++ LPI  LTA  Q++
Sbjct: 986  DEATDGVQALHKVSMQHYDLLITDVNMPNMDGFELTRKLRE--QNSSLPIWGLTANAQAN 1043

Query: 809  DRVRGFEAGANDYLSKPFNKQELAARI-----VAHL 839
            +R +G   G N  L KP     L   +     VAH+
Sbjct: 1044 EREKGLSCGMNLCLFKPLTLDVLKTHLSQLHQVAHI 1079