Pairwise Alignments

Query, 556 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., ABC transporter substrate-binding protein from Variovorax sp. OAS795

 Score = 87.8 bits (216), Expect = 1e-21
 Identities = 133/538 (24%), Positives = 216/538 (40%), Gaps = 79/538 (14%)

Query: 6   KKTALAAAVIAAATSVSAPAFARSELTIVPDFYPTMVRNFNPYL---ATNLRTTTDFIYE 62
           K  AL A    A  ++++ A A   L    +  P    NF P +    T+   TT  +Y 
Sbjct: 13  KLVALLAPTALAVLALASGAAAAKTLVYCSEGSP---ENFYPGVNTTGTSFDVTTQ-VYN 68

Query: 63  PLVVFNEMKGNTPVFRLAESYKMADDLMSVTFDIRKGVKWSDGEA-------FTADDVVY 115
            +V F E  G   V  LAE + ++ D    TF +RKGVKW            F ADD ++
Sbjct: 69  TIVEF-ERGGTKVVPGLAEKWDISADGTQYTFHLRKGVKWHSTSKTFKPTRDFNADDFIF 127

Query: 116 --------SFGLLKAKPE----LDQRGINKWVTSVEKVDEYKVRFRLSEANSNVPYEISL 163
                   S    K   +     +  G+ K + SV++VDE+ VR  L++A +  P+  +L
Sbjct: 128 MLERQWKESDPFFKVTSQNHSYFNDMGMPKLLKSVDRVDEFTVRIVLNQAEA--PFLANL 185

Query: 164 IPIVA-----EHVWKDVKDPT-TFTNENPVGTGPFTVIDTFTPQLYIQCRNPNYWDAANL 217
               A     E+    +K  T    +++P+GTGPF ++      +      P YW     
Sbjct: 186 AMQYAGIQSKEYAIAMLKAGTPEKVDQDPIGTGPFYLVQYQKDAVIRFKAFPQYW-GGKA 244

Query: 218 EVDCLRVPQIANNDQLLGKIVNSELDWTSSFVPDIDRTYAAANPNHHYWYPAAGTQAFMV 277
           ++D L      +      K+   E      +    D      +PN              V
Sbjct: 245 KIDDLVFAITPDASVRWAKLQKGECH-VMPYPNPADLDAIRKDPN----VQVLEQPGLNV 299

Query: 278 NFKNPDPAKKEALDNVDFRRAFSMALDRQTIIDIAFYGSGTV--NDFASGLGYAFEAWSD 335
            + + +  KK   D+V  R+A +MA++++ IID  +  +G    N     +    +A  D
Sbjct: 300 GYLSYNTTKK-PFDDVRVRKAINMAINKKAIIDGVYLSTGVAAKNPIPPTMWSYNDAVKD 358

Query: 336 EATHKKYKGFNTYDVEGSKKLLAKAGFKDVNGDGFVETPSGKSFELLIQSPNGWTDFNNT 395
           +A          YD E +KKLLA+AGF     DGF    S   + + +Q P    +    
Sbjct: 359 DA----------YDPEAAKKLLAQAGFP----DGF----STDLWAMPVQRPYN-PNAKRI 399

Query: 396 VQLAVEQLQEVGIKAKARTPEFAVYNQAMLEGTYD---VAYTNYFHGADPFTYWNSGYNS 452
            +L    L ++ +KA+ ++ E+  Y + +  G +    + +T      D F Y   G  S
Sbjct: 400 AELMQADLAKINVKAEIKSFEWGEYRKRLQAGEHQMGMLGWTGDNGDPDNFLYTLLGCAS 459

Query: 453 ALQ-SGDGMPRFAMHYFTDKKLDGL-------LDSFYKTA-----DKNEQLAIAHGIQ 497
           A   SG  + +F    + D  L           D+ YK A     ++     IAH +Q
Sbjct: 460 AKSASGSNISKFCYQPYEDLVLKAKSTTKQADRDALYKKAQVIFKEQAPWFTIAHAVQ 517