Pairwise Alignments

Query, 556 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  128 bits (322), Expect = 5e-34
 Identities = 129/528 (24%), Positives = 231/528 (43%), Gaps = 73/528 (13%)

Query: 7   KTALAAAVIAAATSVSAPAFARSELTIVPDFYPTMVRNFNPYLATNLRTTTDFIYEPLVV 66
           K  LA A+IAA  S  A A   +++T+  D  P  + + +  L+      +  +++PL+ 
Sbjct: 5   KNKLALALIAAGLSFGAMA---ADITVAYDADPVSM-DPHEQLSGGTLQLSHMVFDPLIR 60

Query: 67  FNEMKGNTPVFRLAESYKMADDLMSVTFDIRKGVKWSDGEAFTADDVVYSFGLLKAKPEL 126
           F +     P  RLAES++  D+  ++ F +RKGVK+  G  FTADDVV++F  L  K   
Sbjct: 61  FTQKMEFEP--RLAESWQRVDN-ETMRFTLRKGVKFHSGNDFTADDVVWTFNRL--KESA 115

Query: 127 DQRGINKWVTSVEKVDEYKVRFRLSEANSNVPYEISLIPIVAEHVW-------------- 172
           D +GI + + S+ KVD+Y +  + +           LI  VA +++              
Sbjct: 116 DFKGIFEPLVSLTKVDDYTIEIKTAGT-------YPLIENVATYIFPMDSKFYTGTTADG 168

Query: 173 ----KDVKDPTTFTNENPVGTGPFTVIDTFTPQLYIQCRNPNYWDAANL-EVDCLRVPQI 227
               + VK   +F +EN  GTGPFTV            RNPNYWD A+   VD L +  I
Sbjct: 169 KNKAEIVKHGNSFASENISGTGPFTVTAREQGVKLEFQRNPNYWDKASKGNVDKLTLAVI 228

Query: 228 ANNDQLLGKIVNSELDWTSSFVPDIDRTYAAANPNHHYWYPAAGTQAFMVNFKNPDPAKK 287
             +   +  +++  +D  +   P+  +    A     +  P      F +N +N +PA K
Sbjct: 229 KEDATRVAALLSGGVDMIAPVSPNDYQRIKDAKGVDLFTMPGTRVITFQMN-QNSNPALK 287

Query: 288 EALDNVDFRRAFSMALDRQTIIDIAFYGSGTVNDFASGLGYAFEAWSDEATHKKYKGFN- 346
           +    V  R+A   A++ + I+D    G+ T     S +GYA              G+N 
Sbjct: 288 D----VRVRQAIVYAINNEGIVDKVMKGAATTAAQQSPVGYA--------------GYNE 329

Query: 347 ----TYDVEGSKKLLAKAGFKDVNGDGFVETPSGKSFELLIQSPNG-WTDFNNTVQLAVE 401
                +D+  +K+L+ +AG++             K F L + +PN  + +     Q A  
Sbjct: 330 NLKPRFDLNKAKELMKEAGYE-------------KGFNLTMIAPNNRYVNDEKIAQAASA 376

Query: 402 QLQEVGIKAKARTPEFAVYNQAMLEGTYDVAYTNYFHGADPFTYWNSGYNSALQSGDGMP 461
            L ++GIK   +T   A Y     +   D+    +    +    +         S  G  
Sbjct: 377 MLSKIGIKVDLKTMPKAQYWPEFDKCAADMLMIGWHPDTEDSANFTEFLTMTRDSNTGKG 436

Query: 462 RFAMHYFTDKKLDGLLDSFYKTADKNEQLAIAHGIQKIIAENQVTIPV 509
           ++   Y+++ ++D L+++  +  D  ++  +   +++I+      +P+
Sbjct: 437 QYNCGYYSNAEVDKLVNAANEETDLEKRSTMLKKVEEILYNEAAFVPL 484