Pairwise Alignments

Query, 556 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 525 a.a., ABC transporter substrate-binding protein from Ralstonia solanacearum PSI07

 Score =  105 bits (262), Expect = 4e-27
 Identities = 121/522 (23%), Positives = 217/522 (41%), Gaps = 56/522 (10%)

Query: 8   TALAAAVIAAATSVSAPAFARSELTIVPDFYPTMVRNFNPYLATNLRTTTDFIYEPLVVF 67
           ++LA A++AAA ++S PA A++      D   ++    N +       + D  +  L+V 
Sbjct: 7   SSLAVALLAAA-AMSNPAGAQTLSIGFADPLSSLDPQLNNHAGDR---SVDVHFWDLLVE 62

Query: 68  NEMKGNTPVFRLAESYKMADDLMSVTFDIRKGVKWSDGEAFTADDVVYSFGLLKAKP--E 125
           N+     P   LA S+K  D   +  F +R GVKW DG+ FTADDV++S+   ++ P   
Sbjct: 63  NKWNKLQP--GLALSWKPLDP-KTWEFKLRPGVKWHDGKPFTADDVIFSYQRARSVPGSV 119

Query: 126 LDQRGINKWVTSVEKVDEYKVRFRLSEANSNVPYEISLIPIVAEHVWKDVKDPTTFTNEN 185
               G  + V SV   D   +  + +  N ++P  ++ + IV++HV +            
Sbjct: 120 ATFAGYLRTVESVTAKDPLTLIIKTTIPNPDLPLNLASVHIVSKHVGEKSNTEDYNAGRA 179

Query: 186 PVGTGPFTVIDTFTPQLYIQCRNPNYWDAANLEVDCLRVPQIANNDQLLGKIVNSELDWT 245
             GTGPF  +        +  RN  YW   +   + +    I N       +++ E+D  
Sbjct: 180 VDGTGPFKFVSYTPGDRVVMARNDAYWGGKS-PWEKVNYRYINNAAARTANLLSGEVDVI 238

Query: 246 SSF-VPDIDRTYAAANPNHHYWYPAAGTQAFMVNFK----------NPDPAKKEALDNVD 294
               V D+ R   + N    Y YP         +F+          +  P     L +V 
Sbjct: 239 DKVSVADLARLRQSPNVK-VYAYPGLRVMLLQPSFRQGPNEYLTGNDGKPLPNNPLLDVH 297

Query: 295 FRRAFSMALDRQTIIDIAFYGSGTVNDFASGLGYAFEAWSDEATHKKYKGFN------TY 348
            RRA S+A+DR+ I+D     + TV             W    T     G+N       Y
Sbjct: 298 VRRALSLAIDRKAIVDRILQSAATV----------ASQWMPTDTF----GYNPEVKDIPY 343

Query: 349 DVEGSKKLLAKAGFKDVNGDGFVETPSGKSFELLIQSPNG-WTDFNNTVQLAVEQLQEVG 407
           D   ++KLLA AGF           P G  F L++  PN  +     T Q   +    +G
Sbjct: 344 DPAQARKLLADAGF-----------PQG--FNLVMHVPNDRYPQGPETAQAVAQFWTRIG 390

Query: 408 IKAKARTPEFAVYNQAMLEGTYDVAYTNYFHGADPFTYWNSGYNSALQSGDGMPRFAMHY 467
           +K K     ++VY     +  Y ++   + +G    +Y      + + + +G+      +
Sbjct: 391 VKTKVEVVPWSVYAGRANKNDYAMSMLAWGNGTGEASYALVNVLATVDTKNGLGASNWGH 450

Query: 468 FTDKKLDGLLDSFYKTADKNEQLAIAHGIQKIIAENQVTIPV 509
           ++++ +D  LD+  +  +  ++ AI     K+++++   +P+
Sbjct: 451 YSNQAVDHALDASTEEFNTEKRAAILRHSVKLVSDDVGVLPL 492