Pairwise Alignments

Query, 556 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., ABC transporter substrate-binding protein from Paraburkholderia sabiae LMG 24235

 Score = 98.6 bits (244), Expect = 5e-25
 Identities = 126/491 (25%), Positives = 198/491 (40%), Gaps = 71/491 (14%)

Query: 55  TTTDFIYEPLVVFNEM----KGNTPVF-RLAESYKMADDLMSVTFDIRKGVKWSDG---- 105
           T+TDF      V+NE+    +G   +   LA S+ ++ D  +VTF +R+GVK+       
Sbjct: 52  TSTDFDASTNAVYNELVQFKRGTLDLEPALATSWDVSADQRTVTFHLRRGVKFQTTAYFK 111

Query: 106 --EAFTADDVVYSFGLLK------------AKPELDQRGINKWVTSVEKVDEYKVRFRLS 151
               F ADDV+++F  +             + P     G +K + S++K D+Y VRF L 
Sbjct: 112 PTRDFNADDVLFTFNRMLHTDDPFRKAYPVSFPYFSDLGFDKNIDSIDKTDDYTVRFHLK 171

Query: 152 EAN----SNVPYEISLIPIVAEHVWK-DVKDPTTFTNENPVGTGPFTVIDTFTPQLYIQC 206
           E +     N+    + I + AE+  K          N+ PVGTGPFT        L    
Sbjct: 172 EPDVIFVRNIAMNFASI-LSAEYASKLSETHREADINQYPVGTGPFTFRSYQKDALIRYD 230

Query: 207 RNPNYWDAANLEVDCLRVPQIANNDQLLGKIVNSELDWTSSFVPDIDRTYAAANPNHHYW 266
            NP+YW  A++ +  L      +    + K+ + E    S F    D      NP+    
Sbjct: 231 ANPDYWRPADVGLAHLVFAITPDPAARIQKLASGECQ-VSVFPRPADLDVVKRNPS---- 285

Query: 267 YPAAGTQAFMVNFKNPDPAKKEALDNVDFRRAFSMALDRQTIIDIAFYGSGTV--NDFAS 324
                   F V F   +   K  LD +  RRA  MA+D+  II   F G+ TV  N    
Sbjct: 286 LTLVSGVGFNVGFVAYNTQHKP-LDQIAVRRALDMAIDKPAIIQAVFSGNATVATNPMPP 344

Query: 325 GLGYAFEAWSDEATHKKYKGFNTYDVEGSKKLLAKAGFKDVNGDGFVETPSGKSFELLIQ 384
                   WS +   K       +D   +K LLA+AGF           P+G  F+L + 
Sbjct: 345 A------QWSYDKALKD----APFDPSKAKALLAQAGF-----------PNG--FDLTLW 381

Query: 385 SPNGWTDFNNTVQLAVEQLQE----VGIKAKARTPEFAVYNQAMLEGTYDVAYTNYFHG- 439
           +      +N   QL  + +Q+    +G+ AK  + E+  YN+   +G    A    + G 
Sbjct: 382 AMPVQRPYNPNAQLMAQLIQQDWAKIGVHAKIVSYEWGEYNRRAKQGGEHDAILYGWSGD 441

Query: 440 -ADPFTYWNSGYNSALQSGDGMPRFAMHYFTDKKLDGLLDSFYKTADKNEQLAIAHGIQK 498
             DP       +   L   D +    +  + D   +GL++    T+D  E+  +    Q 
Sbjct: 442 NGDP-----DNWLGTLLGCDAVHGSNVSKWCDPGFNGLIEKARATSDVQERTRLYEQAQV 496

Query: 499 IIAENQVTIPV 509
           I  +     PV
Sbjct: 497 IFKQQVPYTPV 507