Pairwise Alignments

Query, 556 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 592 a.a., ABC transporter substrate-binding protein from Magnetospirillum magneticum AMB-1

 Score =  101 bits (251), Expect = 9e-26
 Identities = 117/495 (23%), Positives = 191/495 (38%), Gaps = 61/495 (12%)

Query: 58  DFIYEPLVVFNEMKGNTPVFRLAESYKMADDLMSVTFDIRKGVKWSDGEAFTADDVVYSF 117
           D  +E L+V +  +  +    +AES ++  D   V F++R   +W DG+  TADDVV+SF
Sbjct: 80  DLPFETLMVNSADEAFSEYGLIAESVEVPADRSWVIFNLRPKARWHDGKPITADDVVFSF 139

Query: 118 GLLKAKPELDQRGINKWVTSVEKVDEYKVRFRLSEA-NSNVPYEISLIPIVAEHVWKDVK 176
            +LKAK     R     V  VEK+ E +VRF      N  +P  +  +PI+  H W+  +
Sbjct: 140 EVLKAKGHPRYRFYYAAVDKVEKLAERRVRFAFKPGDNRELPLIVGQLPILPRHYWQG-R 198

Query: 177 DPTTFTNENPVGTGPFTVIDTFTPQLYIQCRNPNYWDA------ANLEVDCLRVPQIANN 230
           D    T E P+G+GP+ V    T       R  +YW A           D +R     + 
Sbjct: 199 DFAVTTLEPPLGSGPYKVAGFDTQHTITYERVKDYWGADLAVRKGEYNFDRIRYDSYRDT 258

Query: 231 DQLLGKIVNSELDWTSSFVPDIDRTYAAANPNHHYWYPAAGTQAFMVNFKNPDPA----- 285
              L      E DW S    +  + +A A   +  W      +     F N  PA     
Sbjct: 259 TVALEAFKAGEYDWRSE---NEAKKWATA---YEDWTGLKDGRGRKNAFANQRPAGMQGY 312

Query: 286 ----KKEALDNVDFRRAFSMALDRQTIIDIAFY------GSGTVNDFASGLGYAF----- 330
               ++    ++  RRA  +A D +      FY       S   N   + LG        
Sbjct: 313 AFNLRRALFADIRVRRALGLAFDFEWTNKTLFYSQYKRTASYFANSELASLGLPSPLELK 372

Query: 331 -----------EAWSDEATHKKYKGFNTY--DVEGSKKLLAKAGFKDVNGDGFVETPSGK 377
                      E ++ E      +G      ++  + +LL +AG++ V+G          
Sbjct: 373 VLEPLRGQIPPEVFTAEFKPPATEGDGNIRPNLRAAMRLLEEAGWRVVDGKLVDGAGRPF 432

Query: 378 SFELLIQSPNGWTDFNNTVQLAVEQLQEVGIKAKARTPEFAVYNQAMLEGTYDVAY---- 433
           +FE+L+  P  W          V  L  +GI+A  RT + A Y   +    +D+      
Sbjct: 433 AFEILLVQP-AW---ERITLPFVRNLSRLGIEASVRTVDPAQYKNRIDHFDFDMVVHVWG 488

Query: 434 TNYFHGADPFTYWNSGYNSALQSGDGMPRFAMHYFTDKKLDGLLDSFYKTADKNEQLAIA 493
            +   G +   YW S      +S D      +    +K +D L++      D+   +A  
Sbjct: 489 QSQSPGNEQLGYWGS------ESADEAGGQNVAGIKNKAVDALIEQVISAPDRETLVART 542

Query: 494 HGIQKIIAENQVTIP 508
             + +++  N   IP
Sbjct: 543 RALDRVLLWNHYVIP 557