Pairwise Alignments

Query, 556 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 528 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  102 bits (253), Expect = 5e-26
 Identities = 118/464 (25%), Positives = 191/464 (41%), Gaps = 51/464 (10%)

Query: 75  PVFRLAESYKMADDLMSVTFDIRKGVKWSDGEAFTADDVVYSFGLLKAKPELDQRGINKW 134
           P+ +LA S+ ++ D    TF +R+GVKW DG+ FT+ DV +S   +K K     +G    
Sbjct: 75  PIPQLATSWSVSPDGKQYTFHLRQGVKWHDGKDFTSADVAFSILTVK-KYNSRGQGTFAN 133

Query: 135 VTSVEKVDEYKVRFRLSEANSNVPYEISLI-----PIVAEHVWKDVKDPTTFTNENPVGT 189
           VT V+  D Y     LS+     PY IS       PIV +H++      +   N  PVGT
Sbjct: 134 VTEVKTPDPYTAIVELSQP---APYLISAFSANEAPIVPKHLYDGTDIRSNPYNTAPVGT 190

Query: 190 GPFTVIDTFTPQLYIQCRNPNYWDAANLEVDCLRVPQIANNDQLLGKIVNSELDWTS-SF 248
           GPF   +       +  RNPNYWD     VD L V  I +    L       LD  S S 
Sbjct: 191 GPFIFKEWVRGSHIVYERNPNYWDQPKPYVDRLVVKFIPDAATRLIAFETGALDLGSESP 250

Query: 249 VPDIDRTYAAANP-----NHHYWYPAAGTQAFMVNFKNPDPAKKEALDNVDFRRAFSMAL 303
           VP  +      NP        Y Y    T+    N  NP       L N+  R+A + ++
Sbjct: 251 VPLNELDRVKKNPRLAIETGGYGYGPTQTR-IEFNLDNP------YLKNLKVRQAIAHSI 303

Query: 304 DRQTIIDIAFYGSGTVNDFASGLGYAFEAWSDEATHKKYKGFNTYDVEGSKKLLAKAGFK 363
           +R  + ++ +YG     +  + +      + D A          +D++ +++LL +AGF 
Sbjct: 304 NRDVLRNVVWYGYAV--NSPTPITPELAPFHDSAPSP-----YPFDLKKAEQLLDEAGFP 356

Query: 364 DVNGDGFVETPSGKSFELLIQSPNGWTDFNNTVQLAVEQLQEVGIKAKARTPEFAVYNQA 423
                       G    L+         F    +     L +VGI+   R+ +FA Y + 
Sbjct: 357 --------RQADGIRLRLVHDYMPYGDGFKRVAEYLRSALAKVGIEVTIRSQDFATYVKR 408

Query: 424 MLEGTYDVAYTNY--FHGADPFT-----YWNSGYNSALQSGDGMPRFAMHYFTDKKLDGL 476
           +     D  +TN+   +  DP       YW+  +   +  G+G       ++ + ++D L
Sbjct: 409 VYTDR-DFEFTNHSISNLFDPTVGVQRLYWSQAFKPGVAFGNG------SHYANPEVDKL 461

Query: 477 LDSFYKTADKNEQLAIAHGIQKIIAENQVTIPVMSGAWMYQYNT 520
           L+      D  ++       Q+I+A+    I ++    +  YNT
Sbjct: 462 LEQAAVETDPAKRAEEFRTFQRIVAQELPDINLLQLKRLTIYNT 505