Pairwise Alignments

Query, 556 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 515 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score = 84.3 bits (207), Expect = 1e-20
 Identities = 116/558 (20%), Positives = 224/558 (40%), Gaps = 76/558 (13%)

Query: 5   IKKTALAAAVIAAATSVSAPAFARSELTIVPDFYPTMVRNFNPYLATNLRTTTDFIYEPL 64
           ++K+    A+IA    VS  + A  +   +     + V N +PY   N+R          
Sbjct: 10  LRKSVWKYALIALLAGVSCASHAGKQNDTLVYASDSEVENVSPY-HNNMREG-------- 60

Query: 65  VVFNEMKGNTPVFRLAESYKMADDLMS---------VTFDIRKGVKWSDGEAFTADDVVY 115
           V+   +  +T ++R  +S +   +L +         +   +RKGV + +G+AF+ADDVVY
Sbjct: 61  VILAHLAWDTLIYRDPKSGEYKGELATDWQWESPTVLLLHLRKGVTFHNGDAFSADDVVY 120

Query: 116 SFGLLKA--KPELDQRGINKWVTSVEKVDEYKVRFRLSEA-NSNVPYEISLIPIVAEHVW 172
           +F  +       +  + ++ W+  VEKVD+Y VR  L +  ++ + Y     PI   + +
Sbjct: 121 TFQSIAGPNTASVIPQSVD-WIDKVEKVDDYTVRLHLKKPFSAALEYLSGPTPIYPANYF 179

Query: 173 KDVKDPTTFTNENPVGTGPFTVIDTFTPQLYIQCRNPNYW---DAANLEVDCLRVPQIAN 229
           + VK      ++ PVGTGP+ ++     Q     +NP+Y+        ++  L+   I +
Sbjct: 180 QQVK--LVGFSKAPVGTGPYKIVKVTPGQGVSMVKNPDYFKDSPTGQPKIGKLQFVVIRD 237

Query: 230 NDQLLGKIVNSELDWTSSFVPDIDRTYAAANPNHHYWYPAAGTQAFMVNFKNPDPAKKEA 289
            +  + +++  ++DW      D   +  +A PN            F+    N   A+   
Sbjct: 238 PEARMAQLMTGQVDWIWRVASD-QVSSLSAMPNIAVKSGETMRVGFLQLNINAGGAEGAP 296

Query: 290 LDNVDFRRAFSMALDRQTIIDIAFYGSGTVNDFASGLGYAFEAWSDEATHKKYKGFNTYD 349
           + ++  R+A + A++RQ ++D    G       A    +  +   D +    Y     YD
Sbjct: 297 IKDLRVRQAINYAVNRQAMVDNLVRGGSKPVYSAC---FRTQTACDTSQVISY----PYD 349

Query: 350 VEGSKKLLAKAGFKDVNGDGFVETPSGKSFELLIQSPNGWTDFNNTVQLAVEQLQEVGIK 409
              +K+LL +AG+           P G   +L       +       +  +  L++VGI+
Sbjct: 350 PAKAKQLLVEAGY-----------PDGFDTDLWAYRDRDY------AEAIIGDLRKVGIR 392

Query: 410 AKARTPEFAVYNQAMLEGTYDVAYTNYFHGADPFTYWNSGYNSALQSGDGMPRFAMHYF- 468
           A+    ++ V   A+  G   ++++         T+ +   N A         F   YF 
Sbjct: 393 ARLHFVQYPVMANALASGQAPMSFS---------TWGSFSINDA-------TAFVTPYFG 436

Query: 469 -------TDKKLDGLLDSFYKTADKNEQLAIAHGIQKIIAENQVTIPVMSGAWMYQYNTT 521
                   D KL   L       D  ++ A+   +   I+      P+ S +  Y + + 
Sbjct: 437 GKGSDISKDPKLTAELAQADAVVDPQQRRALYATLLGHISAQAYMAPLFSYSTHYAFTSD 496

Query: 522 RFTGWWSEENPKGRPSVW 539
                W +E P+   + W
Sbjct: 497 LNFQDWPDELPRFAEASW 514