Pairwise Alignments

Query, 556 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 531 a.a., ABC transporter substrate-binding protein from Dickeya dadantii 3937

 Score = 94.7 bits (234), Expect = 8e-24
 Identities = 131/504 (25%), Positives = 194/504 (38%), Gaps = 107/504 (21%)

Query: 7   KTALAAAVIAAATSVSAPAFARSELTIVPDFYPTMVRNFNPYLATNLRTTTDF----IYE 62
           K A+    +AA T  +A A     L    +  P    NFNP L T+  T+ D     IY 
Sbjct: 2   KNAITRVALAALTLAAAQAACAKTLVYCSEGSP---ENFNPQLYTS-GTSVDASAVPIYN 57

Query: 63  PLVVFNEMKGNTPVF-RLAESYKMADDLMSVTFDIRKGVKWSDGEAFT------ADDVVY 115
            LV F    G T +   LAES+ ++ D    TF +RKGVK+     FT      ADDV++
Sbjct: 58  RLVDFKV--GTTELAPSLAESWDISPDGTQYTFHLRKGVKFHRNAQFTPSRDFNADDVIF 115

Query: 116 SFGLLK------------AKPELDQRGINKWVTSVEKVDEYKVRFRLSEANSNVPYEIS- 162
           SF   +                 +       +T+++K+D+Y VRF LS A +    +++ 
Sbjct: 116 SFQRQRDPNHPYHKVSGGTYANFESLSFRSLITAIDKLDDYTVRFTLSHAEAPFLADLAW 175

Query: 163 --LIPIVAEHVWKDVKDPT-TFTNENPVGTGPFTVIDTFTPQLYIQCRNPNYWDAANLEV 219
                + AE+  + +K  T    +  P+GTGPF +         +    PNYW       
Sbjct: 176 YFASILSAEYADQMLKAGTPEKVDLEPIGTGPFQLAQYQKDSRILYQAFPNYWQGK---- 231

Query: 220 DCLRVPQIANNDQLLGKIVNSELDWTSSFVPDIDRTYAAANPNHHYW--YPAAGTQAFMV 277
                   A  D+L+            S  PD    YA    N      +P     A M 
Sbjct: 232 --------AKLDRLV-----------FSITPDASVRYAKLRKNECQVMPFPNPAELADMK 272

Query: 278 NFKN--------------PDPAKKEALDNVDFRRAFSMALDRQTIIDIAFYGSGTVNDFA 323
           N K+                  +K  LDNV  R+A +MA+++  II+  F G+G+     
Sbjct: 273 NNKDITLMQKAGLNIGFLAFNTRKAPLDNVKVRQALTMAINKPAIIEAVFQGTGSAAKNL 332

Query: 324 SGLGYAFEAWSDEATHKKYKGFNTYDVEGSKKLLAKAGFKDVNGDGFVETPSGKSFELLI 383
              G     WS  A  K Y+    YD E ++ LL  AG  +         P        +
Sbjct: 333 LPPG----VWSAAADLKDYE----YDPEKARALLKDAGLAEGTAIDLWAMP--------V 376

Query: 384 QSPNGWTDFNNTVQLAVEQLQ----EVGIKAKARTPEFAVYNQAMLEGTYDVAY------ 433
           Q P     +N   +   E +Q    +VG+KA   + E+  Y + +  G +  A       
Sbjct: 377 QRP-----YNPNARRMAEMIQADWAKVGVKANIVSYEWGEYLKRVRSGEHQAALMGWTTA 431

Query: 434 ----TNYFHGADPFTYWNSGYNSA 453
                N+F      T  N G NSA
Sbjct: 432 TGDPDNFFGPLFTCTSANGGSNSA 455