Pairwise Alignments

Query, 556 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 695 a.a., alpha-galactoside ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 97.4 bits (241), Expect = 2e-24
 Identities = 118/494 (23%), Positives = 204/494 (41%), Gaps = 69/494 (13%)

Query: 69  EMKGNTPVFRLAESYKMADDLMSVTFDIRKGVKWSDGEAFTADDVVYSFGLLKAKPELDQ 128
           + K   P+  LA+S++ ++D  ++T  + KG KWSDGEAF ADDV++ +      P +  
Sbjct: 149 DAKDTEPLPNLAKSWEWSEDGHTLTMHLVKGAKWSDGEAFNADDVMFYWEDAVVDPNVSP 208

Query: 129 RGINKWV------TSVEKVDEYKVRFRLSEA-----------NSNVPYEISLI----PIV 167
            G           T+++K+D+Y V +    A            S  P    ++    P  
Sbjct: 209 LGGGASPEAFGEGTTLKKIDDYTVEWTFKAAFPKQYLYTMAYPSFCPGPSHILKPQHPKY 268

Query: 168 AEHVWKDVKDPTTFTNENPVGTGPFTVIDTFTPQLYIQCRNPNYW--DAANLEVDCL--- 222
           +++ +   K+       N    G +  +      L +  RNP YW  D    ++  L   
Sbjct: 269 SKNTYNQFKNAFPPEYMNMPVMGAWVPVSYRPDDLIVLRRNPYYWKVDEKGQQLPYLNEV 328

Query: 223 --RVPQIANND--QLLGKIVNSELDWTSSFVPDIDRTYAAANPNHHYWYPAAGTQAFMVN 278
             ++   A+ D   + G    S L+   +FV  + R      P    + P        +N
Sbjct: 329 HYKLSTWADRDVQAVAGSGDFSNLEQPENFVASLKRAADPNAPARLAFGPRLIGYNLQMN 388

Query: 279 FK-----NPD---PAKKEALDNVDFRRAFSMALDRQTIIDIAFYGSGTVNDFASGLGYAF 330
           F      NPD    A +E   N  FR+A + ALDR+ I D    G  T   +  G+  + 
Sbjct: 389 FSANGWGNPDERGQAIRELNRNEVFRQAVTSALDRKAIGDSLVKGPFTA-IYPGGIS-SG 446

Query: 331 EAWSDEATHKKYKGFNTYDVEGSKKLLAKAGFKDVNGDGFV----ETPSGKSFELLIQSP 386
            ++ D A+   Y     +++EG+K  LA  G KD +GDGF+    ET  G++ E+ +   
Sbjct: 447 TSFYDRASTVYY----PFNLEGAKAALASIGLKDTDGDGFLNFPKETLGGRNVEITLLVN 502

Query: 387 NGWTDFNNTVQLAVEQLQEVGIKAKARTPEFAVYNQAMLEGTYD-------------VAY 433
           NG+    +  +  V Q+ ++G++    + +    + A   G +D             V  
Sbjct: 503 NGYATDKSLAEGLVGQMAKLGLRVVIHSLDSNQRDAAHYGGQFDWLVRRNSTELSSVVQN 562

Query: 434 TNYFHGADPFTYWNSGYNSALQSGDGMPRFAMHYFTDKKLDGLLDSFYKTADKNEQLAIA 493
           T       P T WN       +S +G     M +  +K++  ++  F  + D  E+  + 
Sbjct: 563 TEQLAPVGPRTSWNH------RSPEGKELDLMPF--EKEMADIVRKFISSQDNAERADLM 614

Query: 494 HGIQKIIAENQVTI 507
              QK+  +N  TI
Sbjct: 615 KQYQKVYTQNLYTI 628