Pairwise Alignments

Query, 328 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., Oligopeptide transport permease protein OppB-like @ Glutathione ABC transporter, permease protein GsiC from Variovorax sp. SCN45

 Score =  150 bits (378), Expect = 5e-41
 Identities = 100/328 (30%), Positives = 165/328 (50%), Gaps = 29/328 (8%)

Query: 1   MGYFLRRLSFYFAALLVAATLNFIIPRAMPGDPVTMMFAHATAQVTPERIEAMKQLLGFV 60
           + YFL+RL      LL+ A L F+    +PGDP  +    A  Q   E+  AM +    +
Sbjct: 2   LNYFLKRLLGLIPTLLIVAVLVFLFVHMLPGDPARL----AAGQEADEQTVAMVRAELGL 57

Query: 61  EGPWYVQYLTYIKSILTWELGTSIKFY-PLSVNELLGGAFGWSLFLAGTAVIISFSIGSV 119
           + P   Q++ +   +L  + GTSI+   P+SV   +G  F  ++ L  T+++ +   G  
Sbjct: 58  DKPLPQQFVNFFTHMLQGDFGTSIRTRRPVSVE--IGERFFPTVMLTITSMVWAVIFGMG 115

Query: 120 LGIFAAWKRGSRYDTFITPGM-LVIQAV--PQVVIAMLAMFTFAIGLSWFPTGYAYTAGT 176
           +GI +A  R    D     GM L +  +  P   + ML M  F++ L W PT  A     
Sbjct: 116 IGIVSAVYRNKWPDRL---GMTLAVSGISFPAFALGMLLMQIFSVQLGWLPTVGA----- 167

Query: 177 TPDWTSWAFIKDVGYHAVLPLFCASIVQIGGFLVNMRNNMINLLAEDYITMAKGKGLSEN 236
               +SW        H +LP                R + + ++ ED++  A+ KG+ E+
Sbjct: 168 ----SSWK-------HYILPSITLGAAVAAVMARFTRASFVEVIQEDFVRTARAKGVRES 216

Query: 237 RVVFNYAARNALLPSVTALSMSLGMAIGGQLIIEIIFNYPGLGTVLFNAITARDYQVLQG 296
            VVF +  RNAL+P VT + +  G  +GG +++E +FN+PGLG +L +A+  RDY V+Q 
Sbjct: 217 SVVFKHTLRNALIPVVTMMGLQFGFLLGGSILVEAVFNWPGLGRLLVDAVQMRDYPVIQT 276

Query: 297 QLLIMTLFMLFFNLLADMLYVVLDPRLR 324
            +L+ +L  +  NL+ D+LY  ++P +R
Sbjct: 277 LVLLFSLEFILINLVVDVLYGYINPTIR 304