Pairwise Alignments

Query, 328 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., ABC transporter permease from Variovorax sp. OAS795

 Score =  156 bits (394), Expect = 7e-43
 Identities = 103/330 (31%), Positives = 168/330 (50%), Gaps = 25/330 (7%)

Query: 1   MGYFLRRLSFYFAALLVAATLNFIIPRAMPGDPVTMMFAHATAQVTPERIEAMKQLLGFV 60
           + YFL+R+      LLV + L F+I + +P DP  MM        TP+ ++A++  LG +
Sbjct: 3   LSYFLKRIGLSVYTLLVVSILVFVITQVLPADPAVMMLGE---NATPDALQALRDQLG-L 58

Query: 61  EGPWYVQYLTYIKSILTWELGTSIKFYPLSVNELLGGAFGWSLFLAGTAVIISFSIGSVL 120
           + P + QYL +    +  + G S++    +V  ++  A G SL LA  ++     I   L
Sbjct: 59  DAPLWQQYLHWFTGAIRGDFGESMRTGQ-AVAPVMMEALGRSLTLAFLSISFMLMIAVPL 117

Query: 121 GIFAAWKRGSRYDTFITPGMLVIQAVPQVVIAMLAMFTFAIGLSWFP-TGY-----AYTA 174
           GI AA +RG   D  ++    V  ++P+ V A L +  FA      P TGY     +++ 
Sbjct: 118 GIIAAVRRGKIADVLVSVVSYVGVSLPEFVTATLLVLVFADFWQILPATGYIPLSESFSG 177

Query: 175 GTTPDWTSWAFIKDVGYHAVLPLFCASIVQIGGFLVNMRNNMINLLAEDYITMAKGKGLS 234
           G                H  LP+   S++ I      +R+ ++++L  DYI  A+ KGLS
Sbjct: 178 GLR--------------HLALPVITVSVILIAHVSRMVRSELVDVLHMDYIRSARLKGLS 223

Query: 235 ENRVVFNYAARNALLPSVTALSMSLGMAIGGQLIIEIIFNYPGLGTVLFNAITARDYQVL 294
           ++ V+F +  RN+LLP++T +++ +G  +GG +++E IF  PG+G  L  AI  RD   +
Sbjct: 224 KHAVLFKHGLRNSLLPTITIVALDVGYLLGGVIVVEEIFALPGIGRQLIVAIQNRDLPAI 283

Query: 295 QGQLLIMTLFMLFFNLLADMLYVVLDPRLR 324
           Q   LIM       N +ADM Y  LD R++
Sbjct: 284 QAGALIMAATYCVVNFVADMAYAALDKRIQ 313