Pairwise Alignments

Query, 328 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., ABC transporter permease from Variovorax sp. OAS795

 Score =  161 bits (408), Expect = 2e-44
 Identities = 101/330 (30%), Positives = 176/330 (53%), Gaps = 14/330 (4%)

Query: 1   MGYFLRRLSFYFAALLVAATLNFIIPRAMPGDPVTMMFAHATAQVTPERIEAMKQLLGFV 60
           + + LRRL      ++  A + F++ + + GDPV  +         PE+I  ++  LG +
Sbjct: 2   IAFVLRRLIQAVIVMIAVAFIAFLLFQYV-GDPVVFLLGQ---DAKPEQIRELRAALG-L 56

Query: 61  EGPWYVQYLTYIKSILTWELGTSIKFYPLSVNELLGGAFGWSLFLAGTAVIISFSIGSVL 120
           + P++VQ+  ++ +    E G S++     V+ L+G  F  +L LA  A +++  IG  +
Sbjct: 57  DQPFFVQFWHFLVNAAQGEFGLSLR-QGAKVSRLIGERFPATLELALVAAVLALFIGIPM 115

Query: 121 GIFAAWKRGS-RYDTFITPGMLVIQAVPQVVIAMLAMFTFAIGLSWFPTGYAYTAGTTPD 179
           G++ A +RG+     F+T  +L + ++P  +I +L +  FA+ L WFP+   +  G T  
Sbjct: 116 GVYTALRRGTFMSQVFMTVSLLGV-SLPTFLIGILLILVFAVLLGWFPS---FGRGETVQ 171

Query: 180 ---WTSWAFIKDVGYHAVLPLFCASIVQIGGFLVNMRNNMINLLAEDYITMAKGKGLSEN 236
              W+S  F  D  +H +LP    +I Q+   +  +R  M+ +L  DYI  A+ +GLS  
Sbjct: 172 FGWWSSGLFRADGWHHIILPAVTLAIFQLTLIMRLVRAEMLEVLRTDYIKFARARGLSNR 231

Query: 237 RVVFNYAARNALLPSVTALSMSLGMAIGGQLIIEIIFNYPGLGTVLFNAITARDYQVLQG 296
            + F +A +N L+P +T   + LG  I   +I E +F +PG+G +   A+T  D  V+  
Sbjct: 232 AIHFGHALKNTLVPVMTITGLQLGGLIAFAIITESVFQWPGMGLLFIQAVTFADVPVMAA 291

Query: 297 QLLIMTLFMLFFNLLADMLYVVLDPRLRKG 326
            L ++ L  +  NL+ D+LY V+DPRLR G
Sbjct: 292 YLCLIALIFVVINLVVDLLYFVVDPRLRVG 321