Pairwise Alignments

Query, 328 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., ABC transporter permease subunit from Paraburkholderia sabiae LMG 24235

 Score =  154 bits (388), Expect = 4e-42
 Identities = 103/336 (30%), Positives = 165/336 (49%), Gaps = 19/336 (5%)

Query: 3   YFLRRLSFYFAALLVAATLNFIIPRAMPGDPVTMMFAHATAQVTPERIEAMKQLLGFVEG 62
           + LRR+       +    L F +   +PGDP+ +M       V P    A    LG  E 
Sbjct: 4   FVLRRIGMVIPTFIGITILAFALIHLIPGDPIEVMMGERG--VDPAMHAAAMHRLGLDE- 60

Query: 63  PWYVQYLTYIKSILTWELGTSIKFYPLSVNELLGGAFGWSLFLAGTAVIISFSIGSVLGI 122
           P  +QYL Y+   L   LGTSI      ++E L   F  ++ L+  A++ +  +G   G+
Sbjct: 61  PLPIQYLHYVGHALQGNLGTSIITNTSVMDEFLA-RFPATVELSICAMLFALIVGLPAGV 119

Query: 123 FAAWKRGSRYDTFITPGMLVIQAVPQVVIAMLAMFTFAIGLSWFP--------------T 168
           FAA +RGS  D  +    L   ++P     ++ +  F+  L W P              T
Sbjct: 120 FAALRRGSVVDHGVMGTALTGYSMPIFWWGLILIMFFSSKLGWTPVSGRIAVEYDIPHVT 179

Query: 169 GYAYTAGTTPDWTSWAFIKDVGYHAVLPLFCASIVQIGGFLVNMRNNMINLLAEDYITMA 228
           G+       P     +F   +  H +LP      + +       R++M+ +L EDYI  A
Sbjct: 180 GFLLIDSLLPGTDEGSFRSALS-HLILPSIVLGTIPLAVVARMTRSSMLEVLREDYIRTA 238

Query: 229 KGKGLSENRVVFNYAARNALLPSVTALSMSLGMAIGGQLIIEIIFNYPGLGTVLFNAITA 288
           + KGLS  RV+  +A RNAL+P VT + + +G  + G ++ E +F++PG+G  L +AI  
Sbjct: 239 RAKGLSPGRVIVVHALRNALIPVVTVIGLQVGTLLAGAVLTETLFSWPGIGKWLIDAIGR 298

Query: 289 RDYQVLQGQLLIMTLFMLFFNLLADMLYVVLDPRLR 324
           RDY V+QG +L++   ++  NL+ D+LY VL+PR+R
Sbjct: 299 RDYPVVQGGILMIATLVIVVNLVVDLLYGVLNPRIR 334