Pairwise Alignments

Query, 328 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  153 bits (387), Expect = 4e-42
 Identities = 96/297 (32%), Positives = 148/297 (49%), Gaps = 10/297 (3%)

Query: 29  MPGDPVTMMFAHATAQVTPERIEAMKQLLGFVEGPWYVQYLTYIKSILTWELGTSIKFYP 88
           MPGDP+ +M A    ++TPE    +K L G ++ PW  ++L ++  +L  ELG S + Y 
Sbjct: 12  MPGDPIDLMIA-GDPRLTPEDAVRLKVLYG-LDRPWTERWLRWLGQVLQGELGYS-RLYA 68

Query: 89  LSVNELLGGAFGWSLFLAGTAVIISFSIGSVLGIFAAWKRGSRYDTFITPGMLVIQAVPQ 148
             V + +  A G S  L  +A+ +S S+   LGI A+ + G   D  +        +VP 
Sbjct: 69  RPVLDAMAPALGNSALLMLSAMALSLSLAIPLGILASLRPGGLVDRLVNLAAFASVSVPV 128

Query: 149 VVIAMLAMFTFAIGLSWFPTGYAYTAGTTPDWTSWAFIKDVGYHAVLPLFCASIVQIGGF 208
             + ++ +  FA+ L W P G   + G            D   H VLP+   ++  IG  
Sbjct: 129 FWLGLMLIVVFAVSLGWLPAGGVESVGDGGP-------TDRLRHMVLPVSALALAGIGQA 181

Query: 209 LVNMRNNMINLLAEDYITMAKGKGLSENRVVFNYAARNALLPSVTALSMSLGMAIGGQLI 268
             +MR  MI     DYI  A+ KG    R+V  +  RNALLP  T +++  G    G LI
Sbjct: 182 TRHMRAAMIGEAGADYIRTARAKGCGPARIVLRHQLRNALLPITTIIALEFGGLFSGALI 241

Query: 269 IEIIFNYPGLGTVLFNAITARDYQVLQGQLLIMTLFMLFFNLLADMLYVVLDPRLRK 325
            E +F +PG+G +++ A+   D+ +    LL+ T   L  ++LADM Y  LDPR+ K
Sbjct: 242 TETVFAWPGMGRLIYEAVMGNDFNLALSGLLLATAMTLAGSILADMAYQRLDPRIGK 298