Pairwise Alignments

Query, 328 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., dipeptide ABC transporter permease DppB from Dickeya dianthicola ME23

 Score =  155 bits (391), Expect = 2e-42
 Identities = 105/337 (31%), Positives = 166/337 (49%), Gaps = 19/337 (5%)

Query: 3   YFLRRLSFYFAALLVAATLNFIIPRAMPGDPVTMMFAHATAQVTPERIEAMKQLLGFVEG 62
           + LRRL       +    L F     +PGDPV +M       ++PER   +   LG ++ 
Sbjct: 4   FILRRLGLVIPTFIGITLLTFAFVHLIPGDPVMIMAGERG--ISPERHAQLMAELG-LDK 60

Query: 63  PWYVQYLTYIKSILTWELGTSIKFYPLSVNELLGGAFGWSLFLAGTAVIISFSIGSVLGI 122
           P + QYL YI  +L  +LG S+K   + V +     F  +L L   A+I +  +G  +G+
Sbjct: 61  PLWDQYLHYINGVLHGDLGMSLKSR-IPVWDEFVPRFKATLELGVCAMIFAVIVGIPVGV 119

Query: 123 FAAWKRGSRYDTFITPGMLVIQAVPQVVIAMLAMFTFAIGLSWFPTG------------- 169
            AA KRGS +D       L   ++P     M+ +   ++ L+  P               
Sbjct: 120 LAAVKRGSVFDHTAVSIALTGYSMPIFWWGMMLIMLVSVQLNLTPVSGRVGDTVFLDDAL 179

Query: 170 --YAYTAGTTPDWTSWAFIKDVGYHAVLPLFCASIVQIGGFLVNMRNNMINLLAEDYITM 227
               +    T  W +    KD   H VLP      + +   +   R+ M+ +L EDYI  
Sbjct: 180 PLSGFMLIDTLIWGADGDFKDAVMHMVLPAVVLGTIPLAVIVRMTRSAMLEVLGEDYIRT 239

Query: 228 AKGKGLSENRVVFNYAARNALLPSVTALSMSLGMAIGGQLIIEIIFNYPGLGTVLFNAIT 287
           A+ KGLS  RV+  +A RNA+LP VT + + +G  + G ++ E IF++PGLG  L +A+ 
Sbjct: 240 ARAKGLSRLRVIVVHALRNAMLPVVTVIGLQVGTMLAGAILTETIFSWPGLGRWLIDALQ 299

Query: 288 ARDYQVLQGQLLIMTLFMLFFNLLADMLYVVLDPRLR 324
            RDY V+Q  +L++   ++  NLL D+LY V++PR+R
Sbjct: 300 RRDYPVVQSGVLLVATMIILVNLLVDLLYGVVNPRIR 336