Pairwise Alignments

Query, 328 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., ABC transporter permease from Bosea sp. OAE506

 Score =  149 bits (376), Expect = 9e-41
 Identities = 95/321 (29%), Positives = 157/321 (48%), Gaps = 5/321 (1%)

Query: 6   RRLSFYFAALLVAATLNFIIPRAMPGDPVTMMFAHATAQVTPERIEAMKQLLGFVEGPWY 65
           RRL+     LL+     F++ +  PGD V  + A        E  + ++Q  G     W 
Sbjct: 9   RRLAASIPTLLLILIGVFVLLQFAPGDTVDALMAQMGGG-DAETAKQLRQYYGLDVSAW- 66

Query: 66  VQYLTYIKSILTWELGTSIKFYPLSVNELLGGAFGWSLFLAGTAVIISFSIGSVLGIFAA 125
            Q   Y+  ++  +LG S   Y   V  ++G     ++ L   ++ ++F  G + G+ AA
Sbjct: 67  AQLGNYLWRLVRLDLGFSA-IYGKPVATVIGERLPATILLMTASLSLAFFFGLIFGVIAA 125

Query: 126 WKRGSRYDTFITPGMLVIQAVPQVVIAMLAMFTFAIGLSWFPTGYAYTAGTTPDWTSWAF 185
                  DT I+   LV  A+P     ++A+  F+I L W P G       T   T +A 
Sbjct: 126 RGVNRWPDTLISTLGLVFYAMPTFWFGLMAIVVFSIYLQWLPAGGF--EDITVARTGFAR 183

Query: 186 IKDVGYHAVLPLFCASIVQIGGFLVNMRNNMINLLAEDYITMAKGKGLSENRVVFNYAAR 245
             D+  H VLP    ++  +  +L  MR +M+ +L  D++  A+ KG+ E RVV  +  R
Sbjct: 184 TLDITSHLVLPTLTLALFYMAIYLRIMRGSMLEVLTLDFVRTARAKGMDETRVVVRHVLR 243

Query: 246 NALLPSVTALSMSLGMAIGGQLIIEIIFNYPGLGTVLFNAITARDYQVLQGQLLIMTLFM 305
           NALLP VT + +  G  +GG +++E +F+ PGLG + + ++  RD   L G + +  L +
Sbjct: 244 NALLPMVTLIGLQAGTMLGGSVVVESVFSLPGLGRLAYESVIQRDLNTLLGIVFVSALLV 303

Query: 306 LFFNLLADMLYVVLDPRLRKG 326
           +  N + D+LY  LDPR+  G
Sbjct: 304 ITVNFIVDLLYARLDPRISTG 324