Pairwise Alignments

Query, 328 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., Dipeptide transport system permease protein DppB from Azospirillum sp. SherDot2

 Score =  162 bits (411), Expect = 8e-45
 Identities = 104/336 (30%), Positives = 171/336 (50%), Gaps = 20/336 (5%)

Query: 3   YFLRRLSFYFAALLVAATLNFIIPRAMPGDPVTMMFAHATAQVTPERIEAMKQLLGFVEG 62
           + L R+S      L    L FI+ R +PGDP+ +        + P+R+ A++  LG  + 
Sbjct: 4   FILTRVSLVIPTFLGITFLTFILIRLVPGDPIEVRVGERG--IAPDRLAALRHELGLDQS 61

Query: 63  PWYVQYLTYIKSILTWELGTSIKFYPLSVNELLGGAFGWSLFLAGTAVIISFSIGSVLGI 122
            W  Q+L Y+ ++L+ + G S+  +   ++E +   F  +L LA  A++ +  +G   GI
Sbjct: 62  LWQ-QFLDYVGNVLSGDFGLSLVTHNSVLSEFVT-LFPATLELALCAMLFATLVGLPAGI 119

Query: 123 FAAWKRGSRYDTFITPGMLVIQAVPQVVIAMLAMFTFAIGLSWFP--------------T 168
            AA KRGS +D  +    L   ++P     +L +  F++ L W P              T
Sbjct: 120 LAAVKRGSLFDHGVMGASLTGYSMPIFWWGLLLILFFSVALGWTPVSGRLDLVYYVEPVT 179

Query: 169 GYAYTAGTTPDWTSWAFIKDVGYHAVLPLFCASIVQIGGFLVNMRNNMINLLAEDYITMA 228
           G+      T     +   +    H +LP      V +       R+ M+ +L EDYI  A
Sbjct: 180 GFMLI--DTLMAGDYEAFRSALSHLILPTIVLGTVPLAVVARMTRSAMLEVLGEDYIRTA 237

Query: 229 KGKGLSENRVVFNYAARNALLPSVTALSMSLGMAIGGQLIIEIIFNYPGLGTVLFNAITA 288
           + KGL+  RV+  +A RNAL+P VT + + +G  +GG ++ E IF++PG+G  L  +I  
Sbjct: 238 RAKGLASGRVIGMHALRNALIPVVTVIGLQVGTLLGGAILTETIFSWPGVGKWLIESINR 297

Query: 289 RDYQVLQGQLLIMTLFMLFFNLLADMLYVVLDPRLR 324
           RDY  LQG +L++   ++  NLL D+LY VL+PR+R
Sbjct: 298 RDYPALQGGVLLIATSVILVNLLVDVLYGVLNPRIR 333