Pairwise Alignments

Query, 328 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., Dipeptide transport system permease protein DppB from Azospirillum sp. SherDot2

 Score =  162 bits (411), Expect = 8e-45
 Identities = 103/323 (31%), Positives = 168/323 (52%), Gaps = 15/323 (4%)

Query: 3   YFLRRLSFYFAALLVAATLNFIIPRAMPGDPVTMMFAHATAQVTPERIEAMKQLLGFVEG 62
           Y +RR +     +L+ A + F+I R +PGDP  +M     +  TP+ I A++  LG  E 
Sbjct: 4   YIVRRFAGMMVVMLLVAMVVFLIARVVPGDPAAVMLG---SSATPDDIAALRGRLGLDE- 59

Query: 63  PWYVQYLTYIKSILTWELGTSIKFYPLSVNELLGGAFGWSLFLAGTAVIISFSIGSVLGI 122
           P   Q+L Y+  I+ ++LG SI F    V + L      +  L   +V I+  IG  +GI
Sbjct: 60  PLLTQFLLYLGQIVRFDLGDSI-FLNRPVAQALAERSELTGLLTMMSVGIAMLIGVPVGI 118

Query: 123 FAAWKRGSRYDTFITPGMLVIQAVPQVVIAMLAMFTFAIGLSWFPT-GYAYTAGTTPDWT 181
            +A KRG   D       ++  ++P   I +  +   A+  +WFP  GY       PD  
Sbjct: 119 LSAAKRGGLVDQTAVGLAMLAASIPSFWIGLTLIKYLAVDHAWFPVAGYG-----PPD-- 171

Query: 182 SWAFIKDVGYHAVLPLFCASIVQIGGFLVNMRNNMINLLAEDYITMAKGKGLSENRVVFN 241
             A + +   H VLP     I      L   R +M+++++ DY+  A+ KGL    VV  
Sbjct: 172 --ADLLERMRHLVLPAIALGIPNSALILRFTRTSMLDVMSHDYVRTARAKGLPPLVVVLK 229

Query: 242 YAARNALLPSVTALSMSLGMAIGGQLIIEIIFNYPGLGTVLFNAITARDYQVLQGQLLIM 301
           +A RNA++P +T + ++  + I G ++ E +F  PG+G ++ +A+  RDY V+QG LL++
Sbjct: 230 HALRNAMIPILTVIGLTTAVMIAGAIVTETVFGLPGVGNLIVSAVLRRDYPVIQGALLVV 289

Query: 302 TLFMLFFNLLADMLYVVLDPRLR 324
           +   +  NL  D+LY V+DPR+R
Sbjct: 290 SAIYVLINLTVDLLYAVVDPRVR 312