Pairwise Alignments

Query, 328 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., Dipeptide transport system permease protein DppB from Azospirillum sp. SherDot2

 Score =  176 bits (445), Expect = 9e-49
 Identities = 104/321 (32%), Positives = 171/321 (53%), Gaps = 5/321 (1%)

Query: 4   FLRRLSFYFAALLVAATLNFIIPRAMPGDPVTMMFAHATAQVTPERIEAMKQLLGFVEGP 63
           F  RL    A L+    +NF +  A PGDP  +M   A A    + +  +++  G ++ P
Sbjct: 8   FASRLVKAAAILIAIVVMNFFLVHAAPGDPAMVMAGEAGA-ADEKFVTQLREQFG-LDRP 65

Query: 64  WYVQYLTYIKSILTWELGTSIKFYPLSVNELLGGAFGWSLFLAGTAVIISFSIGSVLGIF 123
            Y Q  TYI  ++  +LG S +     V ++L      +L L  TA I++ + G  LG  
Sbjct: 66  LYEQLGTYIGKVVQGDLGFSYR-QQRPVWDILAERLPATLVLTLTAFILALAAGVALGTL 124

Query: 124 AAWKRGSRYDTFITPGMLVIQAVPQVVIAMLAMFTFAIGLSWFPTGYAYTAGTTPDWTSW 183
           AA   G+  D+ IT   L+  A P   I ++    F+I L W P     T G    +T  
Sbjct: 125 AAVTVGTWADSAITVIALLAYATPIYWIGLMLSLLFSIQLGWLPAFGYETIGA--GYTGL 182

Query: 184 AFIKDVGYHAVLPLFCASIVQIGGFLVNMRNNMINLLAEDYITMAKGKGLSENRVVFNYA 243
           A + DV  H +LP+   ++  + G+    R +M+ + + D++  AK KGL++ R+V  + 
Sbjct: 183 AHVADVAVHLILPVITLALFYMAGYARLTRASMLEVRSLDFVKTAKAKGLTQGRIVTRHV 242

Query: 244 ARNALLPSVTALSMSLGMAIGGQLIIEIIFNYPGLGTVLFNAITARDYQVLQGQLLIMTL 303
            RNA+LP +T   +  G  +GG ++IE +F +PG+G + F A+  RDYQVL G  L+ ++
Sbjct: 243 LRNAILPVITVAGIQAGQLVGGSILIETVFAWPGIGRLAFEAVLQRDYQVLLGIFLVTSI 302

Query: 304 FMLFFNLLADMLYVVLDPRLR 324
            ++ FN+L D+LY ++DPR++
Sbjct: 303 MVILFNILTDILYGLVDPRIQ 323