Pairwise Alignments

Query, 328 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  160 bits (406), Expect = 3e-44
 Identities = 99/311 (31%), Positives = 167/311 (53%), Gaps = 15/311 (4%)

Query: 15  LLVAATLNFIIPRAMPGDPVTMMFAHATAQVTPERIEAMKQLLGFVEGPWYVQYLTYIKS 74
           + +  T+ F+I R  PGDP  +M        T + I  ++  LG ++    VQY+ YI  
Sbjct: 5   MFLVVTIVFVILRVTPGDPAAVMLG---PDATAQDIAELRTRLG-LDQSLGVQYVYYIGQ 60

Query: 75  ILTWELGTSIKFYPLSVNELLGGAFGWSLFLAGTAVIISFSIGSVLGIFAAWKRGSRYDT 134
           +L  +LG SI F  + V   L      + FL   +++I+  I   +GI+AA++RGS  D 
Sbjct: 61  LLKGDLGQSI-FLNMPVGSALLDRAEPTFFLTIFSLLIAGVIALPIGIYAAYRRGSFVDQ 119

Query: 135 FITPGMLVIQAVPQVVIAMLAMFTFAIGLSWFP-TGYAYTAGTTPDWTSWAFIKDVGYHA 193
             T   ++  ++P   + ++ M  FA+ L  FP +GY     +        F++ + YH 
Sbjct: 120 AATTIAMLAASIPSFWLGLILMQFFAVRLDLFPVSGYGGPGAS--------FLERM-YHL 170

Query: 194 VLPLFCASIVQIGGFLVNMRNNMINLLAEDYITMAKGKGLSENRVVFNYAARNALLPSVT 253
            LP     +V     L   R +M+++L +DY+  A+ KG+ E RVV  +A +NAL+P +T
Sbjct: 171 TLPAIALGLVSSALILRFTRASMLDVLGDDYVRTARAKGVKERRVVMKHALKNALIPILT 230

Query: 254 ALSMSLGMAIGGQLIIEIIFNYPGLGTVLFNAITARDYQVLQGQLLIMTLFMLFFNLLAD 313
            L ++  + I G ++ E +F  PG+G ++ +A+  RDY V+QG LL++    +  N   D
Sbjct: 231 VLGLTAAVLISGAVVTETVFGLPGVGNLVVSAVLRRDYPVIQGALLVIAGLYVLINFAID 290

Query: 314 MLYVVLDPRLR 324
           MLY+++DPR+R
Sbjct: 291 MLYLLVDPRVR 301