Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 279 a.a., ABC transporter permease from Variovorax sp. OAS795

 Score =  129 bits (323), Expect = 1e-34
 Identities = 99/311 (31%), Positives = 159/311 (51%), Gaps = 41/311 (13%)

Query: 1   MKALWKLLRGNRMAMIGVTILGLFFLLAVAAPLLTSHEPDKRTGNPHEYPAFVVKAAKAN 60
           M  + + L   R+ M+   +L +  +LA+ APL  S +P+                    
Sbjct: 3   MPRMLRQLMHRRIVMVSALVLLVIAVLAIGAPLFASIDPN-------------------- 42

Query: 61  PDGWIAENLATDRRTLAMSKKADHILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCFL 120
            D  + + L            A+H+LGT  +GRD++S++ +GAR SLA+     +     
Sbjct: 43  -DTAVLQRLK--------GPSAEHLLGTDELGRDMYSRIVHGARYSLAIAALTALGSVIA 93

Query: 121 ATVIGVSAGYFGGKIDDFLTAAMNIMLVIPQYPLLFVLAAFIGEAGPLTI-ALIIGCTSW 179
            TV+G+ AG+F  ++D  L   ++ M+  P   L   L A +G +   T+ AL++  T  
Sbjct: 94  GTVLGLMAGFFR-RLDTPLMRVVDAMMSFPDILLAIALVAILGPSLINTVLALVLVYTPR 152

Query: 180 AWGARVVRSQTMALREKEFVKAAEVLGESSWRIIFIEILPNLIS--IVGASFIGSVMYAI 237
              ARVVR+ T+ +RE  FV+A   LG  + RI++  ILPNL+S  +V  SFI +  YAI
Sbjct: 153 V--ARVVRASTLVVRELLFVEAVRALGVRTSRILWRHILPNLMSPILVQVSFIFA--YAI 208

Query: 238 MMEATISFLGLGDPNTI-SWGIMLYNVQTSSSMLIGAWWELLAPCLSLTLLVTGLALLNF 296
           + EA +SFLG+G P  I +WG M+   Q  +     A+W +L P L++      L LL  
Sbjct: 209 LAEAGLSFLGVGVPPEIPTWGTMVAGSQQYAHQ---AFWVVLFPGLAIIFTALSLQLLGD 265

Query: 297 AVDEIANPQLR 307
            V ++ +P+L+
Sbjct: 266 GVRDLLDPKLK 276