Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., ABC transporter permease from Variovorax sp. OAS795

 Score =  115 bits (288), Expect = 1e-30
 Identities = 78/293 (26%), Positives = 135/293 (46%), Gaps = 38/293 (12%)

Query: 16  IGVTILGLFFLLAVAAPLLTSHEPDKRTGNPHEYPAFVVKAAKANPDGWIAENLATDRRT 75
           +G+ I+GL  ++ +  P L  H PD                               D   
Sbjct: 40  LGMLIIGLVMVMVLFGPYLAPHSPD-------------------------------DMAP 68

Query: 76  LAMSK--KADHILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCFLATVIGVSAGYFGG 133
           L+  K   A + LGT + GRD+ S++ YGAR ++ + F A      +   IG    + GG
Sbjct: 69  LSRYKGPSAANWLGTDQYGRDLLSRILYGARATVVLAFMATAIGSLIGAFIGTLCAFLGG 128

Query: 134 KIDDFLTAAMNIMLVIPQYPLLFVLAAFIGEAGPLTIALIIGCTSWAWGARVVRSQTMAL 193
           + D+ +   ++ ++ IP      ++   +G+ G +   L I         R+ RS  +A+
Sbjct: 129 RFDEIVMRTIDAVMAIPSLLFALLIVNLMGK-GEINAVLAIAIAFVPSMTRITRSVALAI 187

Query: 194 REKEFVKAAEVLGESSWRIIFIEILPNLISIVGASFIGSVMYAIMMEATISFLGLG-DPN 252
           R+++FV AA   GESS  ++  E+LPN+++ V       V +A+M+ AT+SFLGLG  P 
Sbjct: 188 RKQDFVSAAIARGESSLYVVLREMLPNVVAPVVVEMTIRVAFAVMLFATLSFLGLGAQPP 247

Query: 253 TISWGIMLYNVQTSSSMLIGAWWELLAPCLSLTLLVTGLALLNFAVDEIANPQ 305
              WG+M    +    +   + W +L P  ++ ++  G  LL   + +  NP+
Sbjct: 248 ASEWGLMAAEARKFMHL---SPWMILWPSAAVAMVAIGFNLLGDGLRDALNPK 297