Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., ABC transporter permease subunit from Variovorax sp. OAS795

 Score =  123 bits (308), Expect = 7e-33
 Identities = 86/309 (27%), Positives = 145/309 (46%), Gaps = 32/309 (10%)

Query: 2   KALWKLLRGNRMAMIGVTILGLFFLLAVAAPLLTSHEPDKRTGNPHEYPAFVVKAAKANP 61
           +  W     NR A+IG+  +    L+A+ AP +  H P++              A    P
Sbjct: 21  REFWTAFSANRGAVIGLATIAALLLVALFAPWIAPHAPNETNS-----------AVFLLP 69

Query: 62  DGWIAENLATDRRTLAMSKKADHILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCFLA 121
             W                 A ++LGT  +GRD+ S++ +GAR+SL++G           
Sbjct: 70  PAW------------QQGGSASYLLGTDAIGRDILSRLMFGARLSLSIGVAVVALSVVAG 117

Query: 122 TVIGVSAGYFGGKIDDFLTAAMNIMLVIPQYPLLFVLAAFIGEAGPLTIALIIGCTSWAW 181
            V+G+ AG+F G ++  +   M+I+L +P   L  V+ A +G  G +   L +       
Sbjct: 118 IVLGLVAGFFRGVLEIAIMRLMDIVLTLPSLLLAIVIVAILG-PGLVNAMLAVAIVVLPH 176

Query: 182 GARVVRSQTMALREKEFVKAAEVLGESSWRIIFIEILPNLIS--IVGASFIGSVMYAIMM 239
             R+ R+  +A   +++V AA V G  + R++F E+LPN  +  IV AS    +  AI+ 
Sbjct: 177 YVRITRAAVIAEVSRDYVTAARVSGAGTLRLMFSEVLPNCAAPLIVQASL--GISTAILD 234

Query: 240 EATISFLGLG-DPNTISWGIMLYNVQTSSSMLIGAWWELLAPCLSLTLLVTGLALLNFAV 298
            A + FLGLG  P +  WG ML + +     ++ AWW +  P L++   V    LL   +
Sbjct: 235 AAALGFLGLGAQPPSPEWGTMLADAR---EFVLRAWWVVTFPGLAILAAVLAFNLLGDGL 291

Query: 299 DEIANPQLR 307
            +  +P+L+
Sbjct: 292 RDALDPKLK 300